RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 DARSP14868 501 aaKnown RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 HMGN5P82970 282 aaKnown RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 GPM6BQ13491 265 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 TRIM29Q14134 588 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 TRMT1LQ7Z2T5 733 aaKnown RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 MICALL1Q8N3F8 863 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 HLA-CQ95604 372 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 ADAM2Q99965 735 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
COPB1-206ENST00000529210 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
COPB1-206ENST00000529210 DENND3A2RUS2 1198 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 GAS2O43903 313 aaKnown RBP13.52□□□□□ -0.25
COPB1-206ENST00000529210 CTNNB1P35222 781 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 DNM2P50570 870 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 MTERF2Q49AM1 385 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 BANK1Q8NDB2 785 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 MTMR9Q96QG7 549 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 TRAIPQ9BWF2 469 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 DHX33Q9H6R0 707 aaKnown RBP13.52□□□□□ -0.25
COPB1-206ENST00000529210 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
COPB1-206ENST00000529210 ARID2Q68CP9 1835 aa13.52□□□□□ -0.25
COPB1-206ENST00000529210 DDX11L8A8MPP1 907 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 DRP2Q13474 957 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 NEK9Q8TD19 979 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 LXNQ9BS40 222 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 INO80BQ9C086 356 aaPredicted RBP13.51□□□□□ -0.25
COPB1-206ENST00000529210 FOXP1Q9H334 677 aaPredicted RBP13.51□□□□□ -0.25
COPB1-206ENST00000529210 ZSWIM4Q9H7M6 989 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 LRFN2Q9ULH4 789 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 PCDHA12Q9UN75 941 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
COPB1-206ENST00000529210 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
COPB1-206ENST00000529210 A0A0U1RQF3 1178 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 TMEM150BA6NC51 233 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 WNT7AO00755 349 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 HOXA2O43364 376 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 NEMFO60524 1076 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 SLITRK3O94933 977 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 RFC5P40937 340 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 TFF2Q03403 129 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 RABEP1Q15276 862 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 SAFBQ15424 915 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPB1-206ENST00000529210 SKIV2LQ15477 1246 aaKnown RBP13.5□□□□□ -0.25
COPB1-206ENST00000529210 CALCRLQ16602 461 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 OTUD6AQ7L8S5 288 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
COPB1-206ENST00000529210 NSUN3Q9H649 340 aaKnown RBP13.5□□□□□ -0.25
COPB1-206ENST00000529210 PLAGL2Q9UPG8 496 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 BDP1A6H8Y1 2624 aa13.5□□□□□ -0.25
COPB1-206ENST00000529210 GRM6O15303 877 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 NCK2O43639 380 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 MARCH6O60337 910 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 EOMESO95936 686 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 ZSCAN20P17040 1043 aaPredicted RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 CAMK1Q14012 370 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 PLA2G4FQ68DD2 849 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 ZNF598Q86UK7 904 aaKnown RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 ADAMTS19Q8TE59 1207 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 NLRP7Q8WX94 980 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 SLC7A3Q8WY07 619 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 DYDC2Q96IM9 177 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 EIF2AK1Q9BQI3 630 aaKnown RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 TMEM117Q9H0C3 514 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 UBE2ZQ9H832 354 aaPredicted RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 TTC12Q9H892 705 aaPredicted RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 RNF19AQ9NV58 838 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 RGL1Q9NZL6 768 aa13.49□□□□□ -0.25
COPB1-206ENST00000529210 SUCLA2Q9P2R7 463 aaPredicted RBP13.49□□□□□ -0.25
COPB1-206ENST00000529210 A0A087WZ62 844 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 ASAP2O43150 1006 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 XRCC6P12956 609 aaKnown RBP eCLIP13.48□□□□□ -0.25
COPB1-206ENST00000529210 SFPQP23246 707 aaKnown RBP eCLIP13.48□□□□□ -0.25
COPB1-206ENST00000529210 TRAPPC10P48553 1259 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 NPEPPSP55786 919 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 UBE3AQ05086 875 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 POU5F1BQ06416 359 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 PCBP1Q15365 356 aaKnown RBP eCLIP13.48□□□□□ -0.25
COPB1-206ENST00000529210 CSPP1Q1MSJ5 1256 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 LEXMQ3ZCV2 418 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 FAM102BQ5T8I3 360 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
COPB1-206ENST00000529210 SPPL3Q8TCT6 385 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms