RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 HDAC6Q9UBN7 1215 aa8.07□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF215Q9UL58 517 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-218ENST00000528877 PCDHA6Q9UN73 950 aa8.07□□□□□ -1.12
ITGB1-218ENST00000528877 PCDHA8Q9Y5H6 950 aa8.07□□□□□ -1.12
ITGB1-218ENST00000528877 MAFBQ9Y5Q3 323 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-218ENST00000528877 SCN5AQ14524 2016 aa8.07□□□□□ -1.12
ITGB1-218ENST00000528877 NFASCO94856 1347 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 PRPF3O43395 683 aaKnown RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 ACTN1P12814 892 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CPA1P15085 419 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 IFNAR1P17181 557 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 MSX1P28360 303 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 ADAM17P78536 824 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 FGD1P98174 961 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 APOBRQ0VD83 1088 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 TOB2Q14106 344 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 GPNMBQ14956 572 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 PKN1Q16512 942 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CEP55Q53EZ4 464 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 RNFT1Q5M7Z0 435 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CYFIP1Q7L576 1253 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 RPAINQ86UA6 219 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 SIX5Q8N196 739 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 RETREG2Q8NC44 543 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 TPCN2Q8NHX9 752 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 PHOSPHO2Q8TCD6 241 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CCDC12Q8WUD4 166 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 GTPBP3Q969Y2 492 aaKnown RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 CDX2Q99626 313 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 MXRA8Q9BRK3 442 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 RNF26Q9BY78 433 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 ANO3Q9BYT9 981 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 BCAS3Q9H6U6 928 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 GPAMQ9HCL2 828 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 RTEL1Q9NZ71 1219 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 SCHIP1Q9P0W5 487 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 TFIP11Q9UBB9 837 aaKnown RBP8.06□□□□□ -1.12
ITGB1-218ENST00000528877 PCDHA11Q9Y5I1 949 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 SLC4A7Q9Y6M7 1214 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 GBF1Q92538 1859 aa8.06□□□□□ -1.12
ITGB1-218ENST00000528877 MYH7BA7E2Y1 1941 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 DOCK5Q9H7D0 1870 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 C17orf102A2RUQ5 167 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 MBLAC1A4D2B0 266 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-218ENST00000528877 MEIS1O00470 390 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 EFCAB14O75071 495 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 ATP9AO75110 1047 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 LGR5O75473 907 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 CYP3A4P08684 503 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 SMIM10L2AP0DMW4 78 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 SMIM10L2BP0DMW5 78 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
ITGB1-218ENST00000528877 PDIA3P30101 505 aaKnown RBP8.05□□□□□ -1.12
ITGB1-218ENST00000528877 ANAPC15P60006 121 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 MBTPS1Q14703 1052 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 CNKSR3Q6P9H4 555 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 OTOP2Q7RTS6 562 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 PPP1R13LQ8WUF5 828 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 WNT8BQ93098 351 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 ALG1Q9BT22 464 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF576Q9H609 170 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 JPH1Q9HDC5 661 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-218ENST00000528877 SH3GLB2Q9NR46 395 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 KCNH7Q9NS40 1196 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 CYP46A1Q9Y6A2 500 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 PTPRSQ13332 1948 aa8.05□□□□□ -1.12
ITGB1-218ENST00000528877 NRCAMQ92823 1304 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 TTC28Q96AY4 2481 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 IGLV3-22A0A075B6J6 115 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 GSTTP1A0A1W2PQM5 241 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 GRXCR1A8MXD5 290 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 NBNO60934 754 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 RPLP2P05387 115 aaKnown RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 GNAT1P11488 350 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 FOSL2P15408 326 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 TCF7P36402 384 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 WDR5P61964 334 aaKnown RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ARHGAP4P98171 946 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SETQ01105 290 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ITGB3BPQ13352 177 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF618Q5T7W0 954 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 TAF2Q6P1X5 1199 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 DEFB128Q7Z7B8 93 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 NLRP8Q86W28 1048 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 CCDC148Q8NFR7 591 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 TET1Q8NFU7 2136 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 BICD2Q8TD16 824 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 LMBR1Q8WVP7 490 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SEPT1Q8WYJ6 367 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ATP6V0A1Q93050 837 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ZNF274Q96GC6 653 aaPredicted RBP8.04□□□□□ -1.12
ITGB1-218ENST00000528877 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 ERAP1Q9NZ08 941 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 SLC9A2Q9UBY0 812 aa8.04□□□□□ -1.12
ITGB1-218ENST00000528877 MSRAQ9UJ68 235 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms