RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 KCNA1Q09470 495 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 BIRC3Q13489 604 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 MTMR3Q13615 1198 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 CTTNQ14247 550 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 RRP1BQ14684 758 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 KIF22Q14807 665 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 DRAP1Q14919 205 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 CLUL1Q15846 466 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PTGISQ16647 500 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 TTC31Q49AM3 519 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 DCAF17Q5H9S7 520 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 DCAF8Q5TAQ9 597 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 GJB7Q6PEY0 223 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 RUFY4Q6ZNE9 571 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 STXBP4Q6ZWJ1 553 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 YTHDF3Q7Z739 585 aaKnown RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 C12orf56Q8IXR9 622 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 SH2D3CQ8N5H7 860 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 MYCT1Q8N699 235 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 LMO3Q8TAP4 145 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 RFFLQ8WZ73 363 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 DYDC2Q96IM9 177 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 NEUROG2Q9H2A3 272 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PLEKHA4Q9H4M7 779 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 BCAS3Q9H6U6 928 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 GCNT4Q9P109 453 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 TRPC5Q9UL62 973 aaPredicted RBP9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PLAAQ9Y263 795 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 PCDHAC2Q9Y5I4 1007 aa9.11□□□□□ -0.95
CSTF3-208ENST00000528865 ANKRD62A6NC57 917 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 FAM187AA6NFU0 413 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 FAM196BA6NMK8 535 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 GCOM1H8Y6P7 765 aaPredicted RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 TULP1O00294 542 aaPredicted RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 KRIT1O00522 736 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 MAPK13O15264 365 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 PPFIA2O75334 1257 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 VIL1P09327 827 aaKnown RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 POLR2MP0CAP2 368 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 ITGA4P13612 1032 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 CACNB3P54284 484 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 SNRPFP62306 86 aaKnown RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF844Q08AG5 666 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 TCP10Q12799 353 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 PDCLQ13371 301 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 CEP85LQ5SZL2 805 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 TCERG1LQ5VWI1 586 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 STYK1Q6J9G0 422 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 KIAA0825Q8IV33 1275 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 TPH2Q8IWU9 490 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 SLC35G2Q8TBE7 412 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 NEK9Q8TD19 979 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 AKT1S1Q96B36 256 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 WDR11Q9BZH6 1224 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 INTS2Q9H0H0 1204 aaKnown RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 CARD9Q9H257 536 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 RANBP17Q9H2T7 1088 aaKnown RBP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.1□□□□□ -0.95
CSTF3-208ENST00000528865 TMX2Q9Y320 296 aa9.1□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF536O15090 1300 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 TMCO5BA8MYB1 307 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 UBAP1LF5GYI3 381 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 BUB1BO60566 1050 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 MTA2O94776 668 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 GDF11O95390 407 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 GH2P01242 217 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 PAEPP09466 180 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 MYZAPP0CAP1 466 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 TNFAIP3P21580 790 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 HOXA13P31271 388 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 FNTAP49354 379 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DNA2P51530 1060 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 PTENP60484 403 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 MAPK7Q13164 816 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 ALCAMQ13740 583 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 USH1GQ495M9 461 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 CEP55Q53EZ4 464 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 ZC2HC1CQ53FD0 456 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 LRCH2Q5VUJ6 765 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 KCTD16Q68DU8 428 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DUPD1Q68J44 220 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 C6orf89Q6UWU4 347 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 HS2ST1Q7LGA3 356 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 NLRP14Q86W24 1093 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DDX42Q86XP3 938 aaKnown RBP eCLIP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DNAAF5Q86Y56 855 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 SUGP1Q8IWZ8 645 aaKnown RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 RHOT2Q8IXI1 618 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 PIGOQ8TEQ8 1089 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 ZNF473Q8WTR7 871 aaKnown RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 CCT8L2Q96SF2 557 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 NAP1L3Q99457 506 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 277.9 ms