RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SARSP49591 514 aaKnown RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 SLC24A5Q71RS6 500 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 LINC01465Q8N7H1 131 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 RNF169Q8NCN4 708 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 MTMR9Q96QG7 549 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 FDXACB1Q9BRP7 624 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 INO80BQ9C086 356 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 ATP6V0A4Q9HBG4 840 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 RGS18Q9NS28 235 aa15.97■□□□□ 0.15
CAPN1-216ENST00000528739 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.97■□□□□ 0.15
CAPN1-216ENST00000528739 A0A087WWV3 80 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 POTEMA6NI47 508 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 DLL1O00548 723 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 ZBTB39O15060 712 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 DGKIO75912 1065 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 OR52Z1P0C646 297 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 SRGAP2CP0DJJ0 459 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 DARSP14868 501 aaKnown RBP15.96■□□□□ 0.15
CAPN1-216ENST00000528739 RFC5P40937 340 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 SPIRE1Q08AE8 756 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 NBR1Q14596 966 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 PTPROQ16827 1216 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 KSR1Q8IVT5 923 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 ERMNQ8TAM6 284 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 NEK9Q8TD19 979 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 MTRQ99707 1265 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 THEGQ9P2T0 379 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 RWDD3Q9Y3V2 267 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
CAPN1-216ENST00000528739 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 TBKBP1A7MCY6 615 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 SFPQP23246 707 aaKnown RBP eCLIP15.95■□□□□ 0.14
CAPN1-216ENST00000528739 TRAPPC10P48553 1259 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 GATMP50440 423 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 PIGOQ8TEQ8 1089 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 TCP11Q8WWU5 503 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
CAPN1-216ENST00000528739 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 COL4A3BPQ9Y5P4 624 aa15.95■□□□□ 0.14
CAPN1-216ENST00000528739 PTPRSQ13332 1948 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 IGKV6-21A0A0C4DH24 114 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 LPXNO60711 386 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 BMPR1AP36894 532 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 ORC2Q13416 577 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-216ENST00000528739 EMC2Q15006 297 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-216ENST00000528739 EP400NLQ6ZTU2 488 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 MAEAQ7L5Y9 396 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 CATSPER4Q7RTX7 472 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 CMTR2Q8IYT2 770 aaKnown RBP15.94■□□□□ 0.14
CAPN1-216ENST00000528739 PRPF31Q8WWY3 499 aaKnown RBP15.94■□□□□ 0.14
CAPN1-216ENST00000528739 ZNF689Q96CS4 500 aaPredicted RBP15.94■□□□□ 0.14
CAPN1-216ENST00000528739 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
CAPN1-216ENST00000528739 CDH23Q9H251 3354 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 COL6A3P12111 3177 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 C9IYK1 514 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 H3BNC9 293 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 FGFR1P11362 822 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 POU3F3P20264 500 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 U2AF2P26368 475 aaKnown RBP eCLIP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 FAM102BQ5T8I3 360 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 LARP1BQ659C4 914 aaKnown RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 TWF2Q6IBS0 349 aaKnown RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 HSD17B14Q9BPX1 270 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 C11orf84Q9BUA3 381 aaPredicted RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 DHX33Q9H6R0 707 aaKnown RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 ANKEF1Q9NU02 776 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 DACT1Q9NYF0 836 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 LMCD1Q9NZU5 365 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 PIN4Q9Y237 131 aaKnown RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 MRPL42Q9Y6G3 142 aaKnown RBP15.93■□□□□ 0.14
CAPN1-216ENST00000528739 EVPLQ92817 2033 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 MYO9BQ13459 2157 aa15.93■□□□□ 0.14
CAPN1-216ENST00000528739 SIP14410 1827 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 ASAP2O43150 1006 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 GAS2O43903 313 aaKnown RBP15.92■□□□□ 0.14
CAPN1-216ENST00000528739 USO1O60763 962 aaKnown RBP15.92■□□□□ 0.14
CAPN1-216ENST00000528739 RB1P06400 928 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 CCT6AP40227 531 aaKnown RBP15.92■□□□□ 0.14
CAPN1-216ENST00000528739 MRPS5P82675 430 aaKnown RBP15.92■□□□□ 0.14
CAPN1-216ENST00000528739 LAMTOR4Q0VGL1 99 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 PTGDRQ13258 359 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 DSC3Q14574 896 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 CATSPER3Q86XQ3 398 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 RNF149Q8NC42 400 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 RAB34Q9BZG1 259 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 TUFT1Q9NNX1 390 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 TMEM161AQ9NX61 479 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 PCDHB6Q9Y5E3 794 aa15.92■□□□□ 0.14
CAPN1-216ENST00000528739 HOXA2O43364 376 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 MED24O75448 989 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 DGAT1O75907 488 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 LYPLA2O95372 231 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 NCBP1Q09161 790 aaKnown RBP15.91■□□□□ 0.14
CAPN1-216ENST00000528739 TFDP1Q14186 410 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms