RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 OXCT2Q9BYC2 517 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 LIN28AQ9H9Z2 209 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 WDR6Q9NNW5 1121 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 A1CFQ9NQ94 594 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 RTEL1Q9NZ71 1219 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 VTI1BQ9UEU0 232 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 MTUS1Q9ULD2 1270 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PARP3Q9Y6F1 533 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ROCK2O75116 1388 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ABLIM1O14639 778 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 S100A6P06703 90 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 LDHBP07195 334 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 P4HA1P13674 534 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 TMEM11P17152 192 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 U2AF2P26368 475 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ETV3P41162 512 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PHKA1P46020 1223 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 NFIAQ12857 509 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 FAPQ12884 760 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 MTX1Q13505 466 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 KRBOX4Q5JUW0 171 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 TRAPPC3LQ5T215 181 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 FAM9CQ8IZT9 166 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 UBR7Q8N806 425 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 NEDD1Q8NHV4 660 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 HOOK2Q96ED9 719 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 CMTM3Q96MX0 182 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PPP1R9BQ96SB3 815 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 RABEP2Q9H5N1 569 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 STRN4Q9NRL3 753 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 MCM9Q9NXL9 1143 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 HESX1Q9UBX0 185 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 CCDC39Q9UFE4 941 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 CARD8Q9Y2G2 431 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PDS5AQ29RF7 1337 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 MYO3BQ8WXR4 1341 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ASAP2O43150 1006 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 DIAPH2O60879 1101 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PAPLNO95428 1278 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ATP2B4P23634 1241 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ELF1P32519 619 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ATP6V1E1P36543 226 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 BEX3Q00994 111 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 APOBRQ0VD83 1088 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 BYSLQ13895 437 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 LRRC31Q6UY01 552 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 LPCAT2Q7L5N7 544 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ENOSF1Q7L5Y1 443 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 MAMDC2Q7Z304 686 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 TMC7Q7Z402 723 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PPP1R42Q7Z4L9 355 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ADAMTS18Q8TE60 1221 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 NUP133Q8WUM0 1156 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 NRBF2Q96F24 287 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 CNDP2Q96KP4 475 aaKnown RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 FAM20AQ96MK3 541 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 PANK3Q9H999 370 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 TUBA8Q9NY65 449 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 NKIRAS2Q9NYR9 191 aa4.08□□□□□ -1.76
PTPN22-207ENST00000528414 ZNF624Q9P2J8 865 aaPredicted RBP4.08□□□□□ -1.76
PTPN22-207ENST00000528414 SYNJ2BP-COX16A0A087WUM0 186 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 A0A087X0B3 334 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ABHD14A-ACY1A0A1B0GW23 586 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CAPN9O14815 690 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 FRS3O43559 492 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CAMTA2O94983 1202 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 VIMP08670 466 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 HNF1BP35680 557 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 AP1B1Q10567 949 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 TBX2Q13207 712 aaPredicted RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 OASLQ15646 514 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 C21orf62-AS1Q17RA5 79 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 TRIM71Q2Q1W2 868 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 MMEL1Q495T6 779 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 BEND6Q5SZJ8 279 aaPredicted RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 MCTP1Q6DN14 999 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CCDC13Q8IYE1 715 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 POF1BQ8WVV4 589 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 TCP11Q8WWU5 503 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CTNNBL1Q8WYA6 563 aaPredicted RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ALKBH8Q96BT7 664 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 KIF1BPQ96EK5 621 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 PPM1MQ96MI6 270 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 UPF3BQ9BZI7 483 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 NSRP1Q9H0G5 558 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ATP13A1Q9HD20 1204 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 HMX1Q9NP08 348 aaPredicted RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 PPP1R14DQ9NXH3 145 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 RGL1Q9NZL6 768 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ZFATQ9P243 1243 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 PHTF1Q9UMS5 762 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 RTCBQ9Y3I0 505 aaKnown RBP4.07□□□□□ -1.76
PTPN22-207ENST00000528414 PCDHB13Q9Y5F0 798 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CCDC85CA6NKD9 419 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CCDC169A6NNP5 214 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 NDUFAB1O14561 156 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ERC2O15083 957 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 ZW10O43264 779 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 MTSS1O43312 755 aa4.07□□□□□ -1.76
PTPN22-207ENST00000528414 CTNND1O60716 968 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms