RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 INTS8Q75QN2 995 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 FASTKD5Q7L8L6 764 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 SRGAP1Q7Z6B7 1085 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 MCPH1Q8NEM0 835 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 TRIM58Q8NG06 486 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 SECISBP2LQ93073 1101 aaKnown RBP16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 FZD1Q9UP38 647 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
ECHDC1-220ENST00000528402 ATP8B3O60423 1300 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 LOC102724159A0A0B4J2E5 919 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 SPDYE5A6NIY4 337 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 POTEB2H3BUK9 544 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 PMM2O15305 246 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 EXOC3O60645 756 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 TACC1O75410 805 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 DGAT1O75907 488 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 GFPT2O94808 682 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 TUBBP07437 444 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 TGFB3P10600 412 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 IRX3P78415 501 aaPredicted RBP16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 KCNA1Q09470 495 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 PPIL2Q13356 520 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 PWP2Q15269 919 aaKnown RBP16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 DCAF17Q5H9S7 520 aaPredicted RBP16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 PAPD7Q5XG87 772 aaKnown RBP16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 HGSNATQ68CP4 663 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 HAUS6Q7Z4H7 955 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 RABGGTAQ92696 567 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 GOLGA1Q92805 767 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 CRACR2AQ9BSW2 395 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 NLRC4Q9NPP4 1024 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 A0A0G2JMZ2 1700 aa16.15■□□□□ 0.18
ECHDC1-220ENST00000528402 BACH1O14867 736 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 RGS20O76081 388 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 ATG7O95352 703 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 UCHL3P15374 230 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 PRLRP16471 622 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 OSBPP22059 807 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 PRKCIP41743 596 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 FMO5P49326 533 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 CASP4P49662 377 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 KLHL30Q0D2K2 578 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 DMP1Q13316 513 aaPredicted RBP16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 TDRD12Q587J7 1177 aaKnown RBP16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 XKR3Q5GH77 459 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 DPY19L2P1Q6NXN4 242 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 ABHD15Q6UXT9 468 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 RSRC2Q7L4I2 434 aaKnown RBP16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 VPS36Q86VN1 386 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 GTF3C2Q8WUA4 911 aaPredicted RBP16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 KCNN1Q92952 543 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 RPGRIP1Q96KN7 1286 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 GABBR1Q9UBS5 961 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 PPME1Q9Y570 386 aa16.14■□□□□ 0.17
ECHDC1-220ENST00000528402 MYH9P35579 1960 aaKnown RBP16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 A0A0U1RQJ8 604 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ERCC3P19447 782 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ACTR2P61160 394 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 RAPGEF1Q13905 1077 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 NEDD9Q14511 834 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ELF2Q15723 593 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 SLC18A3Q16572 532 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 UGCGQ16739 394 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ERCC6LQ2NKX8 1250 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ANO5Q75V66 913 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 XXYLT1Q8NBI6 393 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ATRIPQ8WXE1 791 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 CDCA5Q96FF9 252 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 CEP170P1Q96L14 293 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 ALS2CR12Q96Q35 445 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 POLD4Q9HCU8 107 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 AGTPBP1Q9UPW5 1226 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 OTOFQ9HC10 1997 aa16.13■□□□□ 0.17
ECHDC1-220ENST00000528402 SUPT20HL2P0C7V6 817 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 FERP16591 822 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 SLC9A1P19634 815 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 EDNRBP24530 442 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 EPHX2P34913 555 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 STAT1P42224 750 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 AMPD2Q01433 879 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 CKAP4Q07065 602 aaKnown RBP16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 BFSP1Q12934 665 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 TREML2Q5T2D2 321 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 FAM102BQ5T8I3 360 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 SWSAP1Q6NVH7 229 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 USP37Q86T82 979 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms