RNA–Protein interactions for RNA: ENST00000528395.1

TMX2-CTNND1-201, Transcript of TMX2-CTNND1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMX2-CTNND1, Length 585 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1-201ENST00000528395 NFX1Q12986 1120 aaKnown RBP12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 DRP2Q13474 957 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 MXD4Q14582 209 aaPredicted RBP12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 EMC2Q15006 297 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 IL17AQ16552 155 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 KRT79Q5XKE5 535 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 Q7L0L9 218 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 NLRP7Q8WX94 980 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 PSPC1Q8WXF1 523 aaKnown RBP12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 GCOM2Q9BZD3 368 aaPredicted RBP12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 LOXHD1Q8IVV2 1947 aa12.52□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 TTC3P53804 2025 aa12.52□□□□□ -0.4
TMX2-CTNND1-201ENST00000528395 SLC26A4O43511 780 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 POU5F1BQ06416 359 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RESTQ13127 1097 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM228AQ86W67 206 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RHPN2Q8IUC4 686 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SNX29Q8TEQ0 813 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PIGOQ8TEQ8 1089 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PRPF31Q8WWY3 499 aaKnown RBP12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 AK8Q96MA6 479 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SCLT1Q96NL6 688 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MTRQ99707 1265 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NKX2-4Q9H2Z4 354 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MORC2Q9Y6X9 1032 aaPredicted RBP12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MYO9BQ13459 2157 aa12.52□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 COL6A3P12111 3177 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TRANK1O15050 2925 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 A0A087WZ62 844 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CA3P07451 260 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 STAG3L1P0CL83 205 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MYOGP15173 224 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SFPQP23246 707 aaKnown RBP eCLIP12.51□□□□□ -0.411e-8■■■□□ 15.1
TMX2-CTNND1-201ENST00000528395 LAMTOR4Q0VGL1 99 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 HYIQ5T013 277 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SRGAP1Q7Z6B7 1085 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CRIPAKQ8N1N5 446 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MCPH1Q8NEM0 835 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TMEM143Q96AN5 459 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PPP1R16BQ96T49 567 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FDXACB1Q9BRP7 624 aaPredicted RBP12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 IFT122Q9HBG6 1241 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 XPNPEP1Q9NQW7 623 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CHST12Q9NRB3 414 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 RGS18Q9NS28 235 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DNM3Q9UQ16 869 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GBF1Q92538 1859 aa12.51□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PTPRSQ13332 1948 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ARHGEF35A5YM69 484 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CYP11B2P19099 503 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ARL2P36404 184 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SARSP49591 514 aaKnown RBP12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM189BP81408 668 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TAP1Q03518 808 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TFDP1Q14186 410 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 DSC3Q14574 896 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GRIN2CQ14957 1233 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.412e-6■■■□□ 15.8
TMX2-CTNND1-201ENST00000528395 ECM1Q16610 540 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PADI6Q6TGC4 694 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 SLC24A5Q71RS6 500 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 TMCO2Q7Z6W1 182 aaPredicted RBP12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NPAS4Q8IUM7 802 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 KSR1Q8IVT5 923 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 LINC01599Q8WXQ3 324 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 GUCD1Q96NT3 240 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ADAM2Q99965 735 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 MMTAG2Q9BU76 263 aaKnown RBP12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NT5C3AQ9H0P0 336 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 STXBP5LQ9Y2K9 1186 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ARID2Q68CP9 1835 aa12.5□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 A0A087WWV3 80 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 C9IYK1 514 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 UPP2O95045 317 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 EYA4O95677 639 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 CDC25AP30304 524 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PTENP60484 403 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 PTPAQ15257 358 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 IFNLR1Q8IU57 520 aaPredicted RBP12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 ZNF668Q96K58 619 aaPredicted RBP12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 NLRP4Q96MN2 994 aa12.49□□□□□ -0.41
TMX2-CTNND1-201ENST00000528395 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms