RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 RWDD3Q9Y3V2 267 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 MTCH2Q9Y6C9 303 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 COL6A3P12111 3177 aa13.55□□□□□ -0.24
TRAPPC4-209ENST00000528230 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 COL4A4P53420 1690 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 DENND3A2RUS2 1198 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 C9IYK1 514 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 RB1P06400 928 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 OR52Z1P0C646 297 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 NPEPPSP55786 919 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 FAM189BP81408 668 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 DRP2Q13474 957 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 DSC3Q14574 896 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZNF174Q15697 407 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 SPRED2Q7Z698 418 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 TMEM192Q8IY95 271 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 PPP1R16BQ96T49 567 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 GCOM2Q9BZD3 368 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 INO80BQ9C086 356 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 ANKEF1Q9NU02 776 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 LRFN2Q9ULH4 789 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 PCDHB7Q9Y5E2 793 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 ADGRA3Q8IWK6 1321 aa13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 FNDC1Q4ZHG4 1894 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 PRRC2BQ5JSZ5 2229 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-209ENST00000528230 C5orf67F2Z3F1 127 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 H3BNC9 293 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 ASAP2O43150 1006 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 MGEA5O60502 916 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 GJB2P29033 226 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 POLGP54098 1239 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 EPC2Q52LR7 807 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 XKR9Q5GH70 373 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 CMTR2Q8IYT2 770 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 TCP11Q8WWU5 503 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 C17orf80Q9BSJ5 609 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 TUFT1Q9NNX1 390 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 CHST12Q9NRB3 414 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
TRAPPC4-209ENST00000528230 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 LAD1O00515 517 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 ZBTB39O15060 712 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 MUTP22033 750 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 BMPR1AP36894 532 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 TECP42680 631 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 CUL4AQ13619 759 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 PDIA5Q14554 519 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 ERMNQ8TAM6 284 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 PSPC1Q8WXF1 523 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 PPM1EQ8WY54 764 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 POLR3CQ9BUI4 534 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 TMEM161AQ9NX61 479 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 COL4A3BPQ9Y5P4 624 aa13.52□□□□□ -0.25
TRAPPC4-209ENST00000528230 A0A087WZ62 844 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 POTEMA6NI47 508 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 H3BQV1 296 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 DGAT1O75907 488 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 LINC00271P0C7V0 271 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 SPATA31C1P0DKV0 1188 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 SFPQP23246 707 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 RPA1P27694 616 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 GPM6BQ13491 265 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 EMC2Q15006 297 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 PTPROQ16827 1216 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 NAALADL2Q58DX5 795 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 SRGAP1Q7Z6B7 1085 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 CATSPER3Q86XQ3 398 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 GDPD5Q8WTR4 605 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 ZNF668Q96K58 619 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 NACC1Q96RE7 527 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 MTRQ99707 1265 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 FDXACB1Q9BRP7 624 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 PLVAPQ9BX97 442 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 STK24Q9Y6E0 443 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
TRAPPC4-209ENST00000528230 KIAA1671Q9BY89 1806 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 A0A0U1RQF3 1178 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 HOXA2O43364 376 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 EOMESO95936 686 aa13.5□□□□□ -0.25
TRAPPC4-209ENST00000528230 PRPHP41219 470 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms