RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 H0YCG3 227 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 GAS2O43903 313 aaKnown RBP22.57■■□□□ 1.2
SMCO4-203ENST00000526869 IGHA2P01877 340 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 HOXD8P13378 290 aaPredicted RBP22.57■■□□□ 1.2
SMCO4-203ENST00000526869 ADCYAP1R1P41586 468 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 DNM2P50570 870 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 APLP1P51693 650 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 SMTNP53814 917 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 POLGP54098 1239 aaPredicted RBP22.57■■□□□ 1.2
SMCO4-203ENST00000526869 DMP1Q13316 513 aaPredicted RBP22.57■■□□□ 1.2
SMCO4-203ENST00000526869 MYBPC2Q14324 1141 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 MAN2A1Q16706 1144 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 MAEAQ7L5Y9 396 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 HS2ST1Q7LGA3 356 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 ACCSQ96QU6 501 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 GPRC5CQ9NQ84 441 aa22.57■■□□□ 1.2
SMCO4-203ENST00000526869 SLC16A3O15427 465 aaKnown RBP22.56■■□□□ 1.2
SMCO4-203ENST00000526869 TEX33O43247 280 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 TGFB1I1O43294 461 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 FCGRTP55899 365 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 PEX3P56589 373 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 ADAM9Q13443 819 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 ZC2HC1CQ53FD0 456 aaPredicted RBP22.56■■□□□ 1.2
SMCO4-203ENST00000526869 HAUS6Q7Z4H7 955 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 SLC7A3Q8WY07 619 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 CFHR5Q9BXR6 569 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 GBP3Q9H0R5 595 aa22.56■■□□□ 1.2
SMCO4-203ENST00000526869 ZHX1Q9UKY1 873 aaPredicted RBP22.56■■□□□ 1.2
SMCO4-203ENST00000526869 ESPNB1AK53 854 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 MAFO75444 373 aaPredicted RBP22.55■■□□□ 1.2
SMCO4-203ENST00000526869 NR3C1P04150 777 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 PRKCSHP14314 528 aaPredicted RBP22.55■■□□□ 1.2
SMCO4-203ENST00000526869 NR2F2P24468 414 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 NPTX2P47972 431 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 TRIM14Q14142 442 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 PLCB4Q15147 1175 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 TMEM63BQ5T3F8 832 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 TRMT1LQ7Z2T5 733 aaKnown RBP22.55■■□□□ 1.2
SMCO4-203ENST00000526869 SLC9A9Q8IVB4 645 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 C12orf56Q8IXR9 622 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 IFT74Q96LB3 600 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 JPH2Q9BR39 696 aaPredicted RBP22.55■■□□□ 1.2
SMCO4-203ENST00000526869 NOC4LQ9BVI4 516 aaKnown RBP22.55■■□□□ 1.2
SMCO4-203ENST00000526869 KCNF1Q9H3M0 494 aa22.55■■□□□ 1.2
SMCO4-203ENST00000526869 HBP1O60381 514 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 PPFIA4O75335 1185 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 XRCC5P13010 732 aaKnown RBP22.54■■□□□ 1.2
SMCO4-203ENST00000526869 SMPD1P17405 629 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 PPP2R3AQ06190 1150 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 KCNA1Q09470 495 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 GRM1Q13255 1194 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 PPP2R5AQ15172 486 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 CCDC40Q4G0X9 1142 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 MIIPQ5JXC2 388 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 FRMD5Q7Z6J6 570 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 LRRC8AQ8IWT6 810 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 TMEM161BQ8NDZ6 487 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 MKNK1Q9BUB5 465 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 POLR3FQ9H1D9 316 aaPredicted RBP22.54■■□□□ 1.2
SMCO4-203ENST00000526869 ERAP1Q9NZ08 941 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 EXOC7Q9UPT5 735 aa22.54■■□□□ 1.2
SMCO4-203ENST00000526869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMCO4-203ENST00000526869 LGALS2P05162 132 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 ARL2P36404 184 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 UBXN1Q04323 297 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 VWA3BQ502W6 1294 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 FKBP15Q5T1M5 1219 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 CREBRFQ8IUR6 639 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 TRIM59Q8IWR1 403 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 CACTINQ8WUQ7 758 aaKnown RBP22.53■■□□□ 1.2
SMCO4-203ENST00000526869 AFG1LQ8WV93 481 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 BSNDQ8WZ55 320 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 METTL14Q9HCE5 456 aaKnown RBP22.53■■□□□ 1.2
SMCO4-203ENST00000526869 KMT5AQ9NQR1 393 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 AGPAT3Q9NRZ7 376 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 DMAC2Q9NW81 257 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.53■■□□□ 1.2
SMCO4-203ENST00000526869 FLRT1Q9NZU1 646 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 DOCK3Q8IZD9 2030 aa22.53■■□□□ 1.2
SMCO4-203ENST00000526869 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.52■■□□□ 1.2
SMCO4-203ENST00000526869 SLC16A4O15374 487 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 AOC2O75106 756 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 ZNF865P0CJ78 1059 aaPredicted RBP22.52■■□□□ 1.2
SMCO4-203ENST00000526869 SFPQP23246 707 aaKnown RBP eCLIP22.52■■□□□ 1.2
SMCO4-203ENST00000526869 NAMPTP43490 491 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 LACTBP83111 547 aaPredicted RBP22.52■■□□□ 1.2
SMCO4-203ENST00000526869 TNFAIP2Q03169 654 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 GJC2Q5T442 439 aaPredicted RBP22.52■■□□□ 1.2
SMCO4-203ENST00000526869 TRIM50Q86XT4 487 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 MAP4K3Q8IVH8 894 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 SYCP3Q8IZU3 236 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 OR6J1Q8NGC5 347 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 IQCDQ96DY2 449 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 EEF2KMTQ96G04 330 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 ERGIC2Q96RQ1 377 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 FAM184BQ9ULE4 1060 aa22.52■■□□□ 1.2
SMCO4-203ENST00000526869 COL1A2P08123 1366 aa22.51■■□□□ 1.19
SMCO4-203ENST00000526869 IGKV6-21A0A0C4DH24 114 aa22.51■■□□□ 1.19
SMCO4-203ENST00000526869 CCDC169A6NNP5 214 aa22.51■■□□□ 1.19
SMCO4-203ENST00000526869 ZBTB42B2RXF5 422 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms