RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
CD44-224ENST00000526669 SUCLA2Q9P2R7 463 aaPredicted RBP15.22■□□□□ 0.03
CD44-224ENST00000526669 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 SMIM35A0A1B0GVV1 85 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 DCDC2CA8MYV0 355 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 CD4P01730 458 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 IDEP14735 1019 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 PTK7Q13308 1070 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 PNOCQ13519 176 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 GIT2Q14161 759 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 CAMK4Q16566 473 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 SH3RF1Q7Z6J0 888 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 SERINC5Q86VE9 423 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 RHPN2Q8IUC4 686 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 KIAA0319LQ8IZA0 1049 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 DAW1Q8N136 415 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 MCPH1Q8NEM0 835 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 BSNDQ8WZ55 320 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 DNAJC19Q96DA6 116 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 MAP7D2Q96T17 732 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.03
CD44-224ENST00000526669 SEZ6LQ9BYH1 1024 aa15.21■□□□□ 0.03
CD44-224ENST00000526669 GTPBP6O43824 516 aaPredicted RBP15.2■□□□□ 0.02
CD44-224ENST00000526669 TBCAO75347 108 aaKnown RBP15.2■□□□□ 0.02
CD44-224ENST00000526669 CAPN15O75808 1086 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 FAM13AO94988 1023 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 MBD3O95983 291 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 TMOD1P28289 359 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 THPOP40225 353 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 DNM2P50570 870 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 AMPD3Q01432 767 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 FAAP100Q0VG06 881 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 MAPK7Q13164 816 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 TRIM71Q2Q1W2 868 aaKnown RBP15.2■□□□□ 0.02
CD44-224ENST00000526669 C1orf53Q5VUE5 145 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 IER5Q5VY09 327 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 ANKRD33Q7Z3H0 272 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 EXOC8Q8IYI6 725 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 TCP11Q8WWU5 503 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 PSPC1Q8WXF1 523 aaKnown RBP15.2■□□□□ 0.02
CD44-224ENST00000526669 TIGD1Q96MW7 591 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 C7orf25Q9BPX7 421 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 PPP1R12CQ9BZL4 782 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 TRIM9Q9C026 710 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 PRDM5Q9NQX1 630 aaPredicted RBP15.2■□□□□ 0.02
CD44-224ENST00000526669 GINS2Q9Y248 185 aa15.2■□□□□ 0.02
CD44-224ENST00000526669 UMODL1Q5DID0 1318 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 CITO14578 2027 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 GAS2O43903 313 aaKnown RBP15.19■□□□□ 0.02
CD44-224ENST00000526669 CLTBP09497 229 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 GLRA2P23416 452 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 ARL2P36404 184 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 POSTNQ15063 836 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 TAF2Q6P1X5 1199 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 C7orf61Q8IZ16 206 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
CD44-224ENST00000526669 NLRP4Q96MN2 994 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 SCLT1Q96NL6 688 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 LRRC27Q9C0I9 530 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 CLSTN2Q9H4D0 955 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 TMEM39AQ9NV64 488 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 KCND2Q9NZV8 630 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 TBC1D7Q9P0N9 293 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
CD44-224ENST00000526669 LRRIQ4A6NIV6 560 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 SRGAP2CP0DJJ0 459 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 GPC3P51654 580 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 PEX3P56589 373 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 NLRP11P59045 1033 aaKnown RBP15.18■□□□□ 0.02
CD44-224ENST00000526669 MRPS6P82932 125 aaKnown RBP15.18■□□□□ 0.02
CD44-224ENST00000526669 MDM2Q00987 491 aaPredicted RBP15.18■□□□□ 0.02
CD44-224ENST00000526669 LAMTOR4Q0VGL1 99 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 DPYDQ12882 1025 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 COASYQ13057 564 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 CAPSQ13938 189 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 KIZQ2M2Z5 673 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 ZNF618Q5T7W0 954 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 KANK3Q6NY19 840 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 RSPH3Q86UC2 560 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 SFR1Q86XK3 245 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 DRC1Q96MC2 740 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 TOX2Q96NM4 488 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 KIFC3Q9BVG8 833 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 TIPINQ9BVW5 301 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 CDHR5Q9HBB8 845 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 PANK4Q9NVE7 773 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 ODF2LQ9ULJ1 636 aa15.18■□□□□ 0.02
CD44-224ENST00000526669 PTPRSQ13332 1948 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 A0A087WZ62 844 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 CCDC169A6NNP5 214 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 KLRC4O43908 158 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 CKBP12277 381 aa15.17■□□□□ 0.02
CD44-224ENST00000526669 PTMSP20962 102 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms