RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 PBX3P40426 434 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 ERVFC1P60507 584 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 PRKCEQ02156 737 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 FAM43BQ6ZT52 329 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-204ENST00000526468 TRIM67Q6ZTA4 783 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 ZBTB33Q86T24 672 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CRYGNQ8WXF5 182 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 PBXIP1Q96AQ6 731 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-204ENST00000526468 APOL5Q9BWW9 433 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 TMEM117Q9H0C3 514 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 CWH43Q9H720 699 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-204ENST00000526468 PCDHA10Q9Y5I2 948 aa13.26□□□□□ -0.29
CAPN1-204ENST00000526468 MAFBQ9Y5Q3 323 aaPredicted RBP13.26□□□□□ -0.29
CAPN1-204ENST00000526468 TRIP11Q15643 1979 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 ADAMTS3O15072 1205 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 GPR32O75388 356 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 OATP04181 439 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 TECP42680 631 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 NLRP11P59045 1033 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 ZXDAP98168 799 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 CBX2Q14781 532 aaPredicted RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 PDE12Q6L8Q7 609 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 MRPS27Q92552 414 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 BRF1Q92994 677 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 JAKMIP1Q96N16 626 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 ZNF558Q96NG5 402 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 ELAC1Q9H777 363 aaKnown RBP13.25□□□□□ -0.29
CAPN1-204ENST00000526468 LZTS1Q9Y250 596 aa13.25□□□□□ -0.29
CAPN1-204ENST00000526468 PTPRZ1P23471 2315 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 MYH15Q9Y2K3 1946 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 MAGEB2O15479 319 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 ZSCAN20P17040 1043 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 TMOD1P28289 359 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 GNA11P29992 359 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 ADD1P35611 737 aaKnown RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 PTPN5P54829 565 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 SIGLEC14Q08ET2 396 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 DSC3Q14574 896 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 EFCAB12Q6NXP0 572 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 ANKRD54Q6NXT1 300 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 Q6ZUG5 572 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 NLRP7Q8WX94 980 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 SUSD6Q92537 303 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 PHKBQ93100 1093 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 RNF19AQ9NV58 838 aa13.24□□□□□ -0.29
CAPN1-204ENST00000526468 SEPT9Q9UHD8 586 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
CAPN1-204ENST00000526468 HIDE1A8MVS5 230 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 GAS7O60861 476 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 JAK3P52333 1124 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 UGCGQ16739 394 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 TSGA10IPQ3SY00 556 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 BLOC1S2Q6QNY1 142 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 ECHDC2Q86YB7 292 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 FBXL6Q8N531 539 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 LENG9Q96B70 501 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 CASD1Q96PB1 797 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 TEKT3Q9BXF9 490 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 SLC26A6Q9BXS9 759 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 VPS54Q9P1Q0 977 aa13.23□□□□□ -0.29
CAPN1-204ENST00000526468 USP34Q70CQ2 3546 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
CAPN1-204ENST00000526468 ZNF862O60290 1169 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 FGFR4P22455 802 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 GPC3P51654 580 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 PLCB3Q01970 1234 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 KRT17Q04695 432 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 SMC1AQ14683 1233 aaKnown RBP13.22□□□□□ -0.29
CAPN1-204ENST00000526468 PKN1Q16512 942 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 LRCH2Q5VUJ6 765 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 TMC7Q7Z402 723 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 BMP8AQ7Z5Y6 402 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 LINC01465Q8N7H1 131 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 MRPL9Q9BYD2 267 aaKnown RBP13.22□□□□□ -0.29
CAPN1-204ENST00000526468 ADAMTS10Q9H324 1103 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
CAPN1-204ENST00000526468 SPG21Q9NZD8 308 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
CAPN1-204ENST00000526468 ZFHX2Q9C0A1 2572 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms