RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 TCERG1LQ5VWI1 586 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 ANO5Q75V66 913 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 FAM133AQ8N9E0 248 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 CHST13Q8NET6 341 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 IWS1Q96ST2 819 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 EPC1Q9H2F5 836 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 JRKLQ9Y4A0 524 aa17.42■□□□□ 0.38
USH1C-204ENST00000526313 TMEM150BA6NC51 233 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 TACC1O75410 805 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 ZRANB2O95218 330 aaKnown RBP eCLIP17.41■□□□□ 0.38
USH1C-204ENST00000526313 PRLRP16471 622 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 ANXA13P27216 316 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 KLHL30Q0D2K2 578 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 LBX2Q6XYB7 198 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 MSANTD4Q8NCY6 345 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 PARD6BQ9BYG5 372 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
USH1C-204ENST00000526313 GCNT4Q9P109 453 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 TCEAL9Q9UHQ7 104 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 SALL4Q9UJQ4 1053 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 A0A0G2JMZ2 1700 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 CTAGE15A4D2H0 777 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 MAPK13O15264 365 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 CTAGE8P0CG41 777 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 XKR9Q5GH70 373 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 MAEAQ7L5Y9 396 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 CTAGE6Q86UF2 777 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 CTAGE4Q8IX94 777 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 MLXIPQ9HAP2 919 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 DAAM1Q9Y4D1 1078 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 CAPN6Q9Y6Q1 641 aa17.41■□□□□ 0.38
USH1C-204ENST00000526313 A0A087X0T9 212 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 ZNF862O60290 1169 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
USH1C-204ENST00000526313 FAM228BP0C875 321 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 ICAM3P32942 547 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 CYP2J2P51589 502 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 NPEPPSP55786 919 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 UTP14CQ5TAP6 766 aaKnown RBP17.4■□□□□ 0.38
USH1C-204ENST00000526313 GPIHBP1Q8IV16 184 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 DNERQ8NFT8 737 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 NTPCRQ9BSD7 190 aaKnown RBP17.4■□□□□ 0.38
USH1C-204ENST00000526313 ANKZF1Q9H8Y5 726 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 SPON1Q9HCB6 807 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 LUC7LQ9NQ29 371 aaKnown RBP17.4■□□□□ 0.38
USH1C-204ENST00000526313 PDLIM7Q9NR12 457 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 AJAP1Q9UKB5 411 aaPredicted RBP17.4■□□□□ 0.38
USH1C-204ENST00000526313 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
USH1C-204ENST00000526313 PTK2Q05397 1052 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 BFSP1Q12934 665 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 PRKG1Q13976 671 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 TREML2Q5T2D2 321 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 C10orf76Q5T2E6 689 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 ABHD15Q6UXT9 468 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 DLK2Q6UY11 383 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 SPAG5Q96R06 1193 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 RAB21Q9UL25 225 aa17.39■□□□□ 0.38
USH1C-204ENST00000526313 POTEB2H3BUK9 544 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 EXOC3O60645 756 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 MOCS3O95396 460 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 NAB2Q15742 525 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 PLA2G4FQ68DD2 849 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 OTUD6AQ7L8S5 288 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 ZNF571Q7Z3V5 609 aaPredicted RBP17.39■□□□□ 0.37
USH1C-204ENST00000526313 CCDC43Q96MW1 224 aaKnown RBP17.39■□□□□ 0.37
USH1C-204ENST00000526313 SH2D3AQ9BRG2 576 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 C17orf75Q9HAS0 396 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 JPH1Q9HDC5 661 aaPredicted RBP17.39■□□□□ 0.37
USH1C-204ENST00000526313 GPRC5CQ9NQ84 441 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 OTOFQ9HC10 1997 aa17.39■□□□□ 0.37
USH1C-204ENST00000526313 ATP8B3O60423 1300 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 BTNL10A8MVZ5 291 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 PSAPP07602 524 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 PEX3P56589 373 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 CBWD6Q4V339 395 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 CBWD3Q5JTY5 395 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 CBWD5Q5RIA9 395 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 RIOX2Q8IUF8 465 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 TMEM161BQ8NDZ6 487 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 SPIRE2Q8WWL2 714 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 ATP6V0A1Q93050 837 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 DCPSQ96C86 337 aaKnown RBP17.38■□□□□ 0.37
USH1C-204ENST00000526313 HVCN1Q96D96 273 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 RPGRIP1Q96KN7 1286 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 GABBR1Q9UBS5 961 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 SLC9A2Q9UBY0 812 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 ADAMTS1Q9UHI8 967 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 SNX12Q9UMY4 172 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 ATP8B1O43520 1251 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 PLS1Q14651 629 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 TMCO3Q6UWJ1 677 aa17.38■□□□□ 0.37
USH1C-204ENST00000526313 INTS8Q75QN2 995 aaKnown RBP17.38■□□□□ 0.37
USH1C-204ENST00000526313 LMO3Q8TAP4 145 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms