RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 GAS7O60861 476 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 GLP2RO95838 553 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 OATP04181 439 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 DNM2P50570 870 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 CLCN3P51790 818 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 ERVFC1P60507 584 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 NHLH1Q02575 133 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 KCNT2Q6UVM3 1135 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 TMC7Q7Z402 723 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 TRIM22Q8IYM9 498 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 RDM1Q8NG50 284 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 PBXIP1Q96AQ6 731 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
COLCA1-202ENST00000526150 TEKT3Q9BXF9 490 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 MRPL9Q9BYD2 267 aaKnown RBP13.76□□□□□ -0.21
COLCA1-202ENST00000526150 INO80BQ9C086 356 aaPredicted RBP13.76□□□□□ -0.21
COLCA1-202ENST00000526150 CWH43Q9H720 699 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 SPG21Q9NZD8 308 aa13.76□□□□□ -0.21
COLCA1-202ENST00000526150 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 M0R296 226 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 FGFR1P11362 822 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 SKIP12755 728 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 IFNAR1P17181 557 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 MRE11P49959 708 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 ZXDAP98168 799 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 TPRNQ4KMQ1 711 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 PLPP4Q5VZY2 271 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 ECHDC2Q86YB7 292 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 FAM177A1Q8N128 213 aaPredicted RBP13.75□□□□□ -0.21
COLCA1-202ENST00000526150 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 KCNB2Q92953 911 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 RPGRIP1Q96KN7 1286 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 CASD1Q96PB1 797 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 IRF2BPLQ9H1B7 796 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 CHST12Q9NRB3 414 aa13.75□□□□□ -0.21
COLCA1-202ENST00000526150 A0A0U1RQF3 1178 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 REC8O95072 547 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 DARSP14868 501 aaKnown RBP13.74□□□□□ -0.21
COLCA1-202ENST00000526150 TECP42680 631 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 ALDH7A1P49419 539 aaKnown RBP13.74□□□□□ -0.21
COLCA1-202ENST00000526150 PTPN5P54829 565 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 NLRP5P59047 1200 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 PRKCEQ02156 737 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 SMC1AQ14683 1233 aaKnown RBP13.74□□□□□ -0.21
COLCA1-202ENST00000526150 LRCH2Q5VUJ6 765 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 CES5AQ6NT32 575 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 ANKRD54Q6NXT1 300 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 LRRC71Q8N4P6 559 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 LINC01465Q8N7H1 131 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 NLRP7Q8WX94 980 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 SUSD6Q92537 303 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 CASP10Q92851 521 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 PHKBQ93100 1093 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 JPH2Q9BR39 696 aaPredicted RBP13.74□□□□□ -0.21
COLCA1-202ENST00000526150 SLC26A6Q9BXS9 759 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
COLCA1-202ENST00000526150 ADAMTS10Q9H324 1103 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 NR2E1Q9Y466 385 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 ZNF318Q5VUA4 2279 aa13.74□□□□□ -0.21
COLCA1-202ENST00000526150 TECTAO75443 2155 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 WDR81Q562E7 1941 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 MSH4O15457 936 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 SFPQP23246 707 aaKnown RBP eCLIP13.73□□□□□ -0.21
COLCA1-202ENST00000526150 RPS6KB1P23443 525 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 HSPA4P34932 840 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 GPC3P51654 580 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 ITIH3Q06033 890 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 GIT2Q14161 759 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 XKR3Q5GH77 459 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
COLCA1-202ENST00000526150 MIER3Q7Z3K6 550 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 ZBTB33Q86T24 672 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 EXOC8Q8IYI6 725 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 FBXL6Q8N531 539 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 SLC5A5Q92911 643 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 TMEM169Q96HH4 297 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 NECTIN4Q96NY8 510 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 PCDHGC5Q9Y5F6 944 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
COLCA1-202ENST00000526150 CPLX1O14810 134 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 CHMP2AO43633 222 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 ZNF862O60290 1169 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 DKC1O60832 514 aaKnown RBP eCLIP13.72□□□□□ -0.21
COLCA1-202ENST00000526150 SSRP1Q08945 709 aaKnown RBP13.72□□□□□ -0.21
COLCA1-202ENST00000526150 NTRK3Q16288 839 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 Q4G0T1 1027 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 GALNT17Q6IS24 598 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 ZNF410Q86VK4 478 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 LENG9Q96B70 501 aa13.72□□□□□ -0.21
COLCA1-202ENST00000526150 EPB41L2O43491 1005 aaKnown RBP13.71□□□□□ -0.21
COLCA1-202ENST00000526150 CPA1P15085 419 aa13.71□□□□□ -0.21
COLCA1-202ENST00000526150 CA8P35219 290 aa13.71□□□□□ -0.21
COLCA1-202ENST00000526150 RAB27AP51159 221 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms