RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 BRAPQ7Z569 592 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 NOP9Q86U38 636 aaKnown RBP5.82□□□□□ -1.48
USP48-211ENST00000526044 HOMER1Q86YM7 354 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 SYNPOQ8N3V7 929 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 TTLL11Q8NHH1 800 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 CLEC4DQ8WXI8 215 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 SCLYQ96I15 445 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 NOX5Q96PH1 765 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 PDGFDQ9GZP0 370 aaPredicted RBP5.82□□□□□ -1.48
USP48-211ENST00000526044 NUDCQ9Y266 331 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 USP54Q70EL1 1684 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 LTN1O94822 1766 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 SLIT3O75094 1523 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 A0A0G2JLL6 359 aaPredicted RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 TCRBV16S1A1N1A0A5B0 115 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 SASH1O94885 1247 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 RASGRP1O95267 797 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 LRG1P02750 347 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 HOXC9P31274 260 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 MEX3CQ5U5Q3 659 aaKnown RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 KRTAP5-3Q6L8H2 238 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 TEPPQ6URK8 271 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 ARHGAP36Q6ZRI8 547 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 KCTD1Q719H9 257 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 OSTM1Q86WC4 334 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 RBM12BQ8IXT5 1001 aaKnown RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 NLGN4XQ8N0W4 816 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 LINC00482Q8N8I6 264 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 ZBTB8AQ96BR9 441 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 LTV1Q96GA3 475 aaPredicted RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 GORASP1Q9BQQ3 440 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 C11orf84Q9BUA3 381 aaPredicted RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 TRIM39Q9HCM9 518 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 PRDM11Q9NQV5 511 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 HSPBP1Q9NZL4 362 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 SHPRHQ149N8 1683 aa5.81□□□□□ -1.48
USP48-211ENST00000526044 COL22A1Q8NFW1 1626 aaPredicted RBP5.81□□□□□ -1.48
USP48-211ENST00000526044 CPDO75976 1380 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 KIF24Q5T7B8 1368 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 KIAA0232Q92628 1395 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 RGPD5Q99666 1765 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 CCDC66A2RUB6 948 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 PPP1R12AO14974 1030 aaPredicted RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 ASMTLO95671 621 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 PDE6AP16499 860 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 IL13P35225 146 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 DNM2P50570 870 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 EPHA5P54756 1037 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 GRIN1Q05586 938 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 TCEA2Q15560 299 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 EP400NLQ6ZTU2 488 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 FGD2Q7Z6J4 655 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 PRRT2Q7Z6L0 340 aaPredicted RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 SAPCD2Q86UD0 394 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 DHX37Q8IY37 1157 aaKnown RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 FAM177A1Q8N128 213 aaPredicted RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 TTLL6Q8N841 843 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 LINC01356Q8N9X3 169 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 MARCH10Q8NA82 808 aaPredicted RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 KYQ8NBH2 561 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 PNISRQ8TF01 805 aaKnown RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 APPBP2Q92624 585 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 CLUHP3Q96NS8 147 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 KCNC2Q96PR1 638 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 PNNQ9H307 717 aaKnown RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 CBLCQ9ULV8 474 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 MRPL42Q9Y6G3 142 aaKnown RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 PHRF1Q9P1Y6 1649 aaKnown RBP5.8□□□□□ -1.48
USP48-211ENST00000526044 INSRP06213 1382 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 FLT4P35916 1363 aa5.8□□□□□ -1.48
USP48-211ENST00000526044 CRYBG1Q9Y4K1 1723 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 NFAT5O94916 1531 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 TCRBV5S4A2TA0A5A2 114 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 FFAR3O14843 346 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 SMARCA5O60264 1052 aaPredicted RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 RFPL3O75679 317 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 NPTXRO95502 500 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 LTFP02788 710 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 CKMP06732 381 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 U2AF1L5P0DN76 240 aaPredicted RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 ITGA1P56199 1179 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 LACTBP83111 547 aaPredicted RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 U2AF1Q01081 240 aaKnown RBP eCLIP5.79□□□□□ -1.481e-7■□□□□ 11.3
USP48-211ENST00000526044 EIF4A2Q14240 407 aaKnown RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 WDR43Q15061 677 aaKnown RBP eCLIP5.79□□□□□ -1.48
USP48-211ENST00000526044 VMACQ2NL98 169 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 PAN2Q504Q3 1202 aaKnown RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 TTLL7Q6ZT98 887 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 C16orf86Q6ZW13 317 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 CXorf38Q8TB03 319 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 SH3RF2Q8TEC5 729 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
USP48-211ENST00000526044 CD244Q9BZW8 370 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 FANCLQ9NW38 375 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 RTEL1Q9NZ71 1219 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 SRPK3Q9UPE1 567 aa5.79□□□□□ -1.48
USP48-211ENST00000526044 TELO2Q9Y4R8 837 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms