RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 HAS1Q92839 578 aa11.74□□□□□ -0.53
RBBP4-216ENST00000525506 CLP1Q92989 425 aaKnown RBP11.74□□□□□ -0.53
RBBP4-216ENST00000525506 ADAMTS10Q9H324 1103 aa11.74□□□□□ -0.53
RBBP4-216ENST00000525506 ALG13Q9NP73 1137 aaKnown RBP11.74□□□□□ -0.53
RBBP4-216ENST00000525506 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
RBBP4-216ENST00000525506 SEPT9Q9UHD8 586 aaPredicted RBP11.74□□□□□ -0.53
RBBP4-216ENST00000525506 LRFN2Q9ULH4 789 aa11.74□□□□□ -0.53
RBBP4-216ENST00000525506 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
RBBP4-216ENST00000525506 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 BDP1A6H8Y1 2624 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 DDX11L8A8MPP1 907 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 C5orf67F2Z3F1 127 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 GPR182O15218 404 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 CSDE1O75534 798 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 STAG3L1P0CL83 205 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 KCNA5P22460 613 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 PSMC5P62195 406 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 TBC1D8BQ0IIM8 1120 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 TARBP2Q15633 366 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 CALCRLQ16602 461 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 XKR3Q5GH77 459 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 ARID2Q68CP9 1835 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 CMTR2Q8IYT2 770 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 NEK9Q8TD19 979 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 MTMR9Q96QG7 549 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 NIFKQ9BYG3 293 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 UBE2ZQ9H832 354 aaPredicted RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 NOL7Q9UMY1 257 aaKnown RBP11.73□□□□□ -0.53
RBBP4-216ENST00000525506 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
RBBP4-216ENST00000525506 TBKBP1A7MCY6 615 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 C9IYK1 514 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 RB1P06400 928 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 P4HBP07237 508 aaKnown RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 FGFR1P11362 822 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 DNAJB1P25685 340 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 TMOD1P28289 359 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 GJB2P29033 226 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 QARSP47897 775 aaKnown RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 GPC3P51654 580 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 GUCY1B3Q02153 619 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 GNL2Q13823 731 aaKnown RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 DSC3Q14574 896 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 EPHA7Q15375 998 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 PLA2G4FQ68DD2 849 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
RBBP4-216ENST00000525506 PCDHA12Q9UN75 941 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
RBBP4-216ENST00000525506 MUC3AQ02505 3323 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 H3BQ06 376 aaPredicted RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 LAD1O00515 517 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 WNT7AO00755 349 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 MARCH6O60337 910 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 LYPLA2O95372 231 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 ITGB1P05556 798 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 PDCP20941 246 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 NPEPPSP55786 919 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 CAMK1Q14012 370 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 TIGD5Q53EQ6 642 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 ODR4Q5SWX8 454 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 ANO5Q75V66 913 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 KSR1Q8IVT5 923 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 C4orf19Q8IY42 314 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 EXOC8Q8IYI6 725 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 KLHL23Q8NBE8 558 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 SNX21Q969T3 373 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 SCLT1Q96NL6 688 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 JPH2Q9BR39 696 aaPredicted RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 TTC12Q9H892 705 aaPredicted RBP11.71□□□□□ -0.53
RBBP4-216ENST00000525506 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 PLAGL2Q9UPG8 496 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 RWDD3Q9Y3V2 267 aa11.71□□□□□ -0.53
RBBP4-216ENST00000525506 H3BQV1 296 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 ZBTB39O15060 712 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 GAS2O43903 313 aaKnown RBP11.7□□□□□ -0.54
RBBP4-216ENST00000525506 DARSP14868 501 aaKnown RBP11.7□□□□□ -0.54
RBBP4-216ENST00000525506 FAM189BP81408 668 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 CDC42EP1Q00587 391 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 CTTNQ14247 550 aaKnown RBP11.7□□□□□ -0.54
RBBP4-216ENST00000525506 LEXMQ3ZCV2 418 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 TTC38Q5R3I4 469 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
RBBP4-216ENST00000525506 NCAPH2Q6IBW4 605 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 ADGRD2Q7Z7M1 963 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 NLRP7Q8WX94 980 aa11.7□□□□□ -0.54
RBBP4-216ENST00000525506 PLVAPQ9BX97 442 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms