RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 RWDD3Q9Y3V2 267 aa19.59■□□□□ 0.73
NR1H3-228ENST00000525441 MTCH2Q9Y6C9 303 aa19.59■□□□□ 0.73
NR1H3-228ENST00000525441 CHD7Q9P2D1 2997 aa19.59■□□□□ 0.73
NR1H3-228ENST00000525441 GAS2O43903 313 aaKnown RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 DGKIO75912 1065 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 LYPLA2O95372 231 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 DARSP14868 501 aaKnown RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 GJB2P29033 226 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 DRP2Q13474 957 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 BTG3Q14201 252 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 CCDC85BQ15834 202 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 XKR9Q5GH70 373 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 SLC24A5Q71RS6 500 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 ZNF410Q86VK4 478 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 GDPD5Q8WTR4 605 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 CCDC43Q96MW1 224 aaKnown RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 C17orf80Q9BSJ5 609 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 INO80BQ9C086 356 aaPredicted RBP19.58■□□□□ 0.72
NR1H3-228ENST00000525441 RGS18Q9NS28 235 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 PCDHB7Q9Y5E2 793 aa19.58■□□□□ 0.72
NR1H3-228ENST00000525441 H3BQV1 296 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 MGEA5O60502 916 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 ZSCAN20P17040 1043 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 EPC2Q52LR7 807 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 MCTP1Q6DN14 999 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 RHPN2Q8IUC4 686 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 TMEM192Q8IY95 271 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 CMTR2Q8IYT2 770 aaKnown RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 ERMNQ8TAM6 284 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 TCP11Q8WWU5 503 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 ZNF689Q96CS4 500 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 ZNF668Q96K58 619 aaPredicted RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 DHX33Q9H6R0 707 aaKnown RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 RC3H2Q9HBD1 1191 aaKnown RBP19.57■□□□□ 0.72
NR1H3-228ENST00000525441 ANKEF1Q9NU02 776 aa19.57■□□□□ 0.72
NR1H3-228ENST00000525441 POTEMA6NI47 508 aa19.56■□□□□ 0.72
NR1H3-228ENST00000525441 LPXNO60711 386 aa19.56■□□□□ 0.72
NR1H3-228ENST00000525441 IBSPP21815 317 aaPredicted RBP19.56■□□□□ 0.72
NR1H3-228ENST00000525441 EMC2Q15006 297 aa19.56■□□□□ 0.72
NR1H3-228ENST00000525441 CRIPAKQ8N1N5 446 aa19.56■□□□□ 0.72
NR1H3-228ENST00000525441 PSPC1Q8WXF1 523 aaKnown RBP19.56■□□□□ 0.72
NR1H3-228ENST00000525441 PRRC2BQ5JSZ5 2229 aaKnown RBP19.56■□□□□ 0.72
NR1H3-228ENST00000525441 A0A087WZ62 844 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 C9IYK1 514 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 XRCC6P12956 609 aaKnown RBP eCLIP19.55■□□□□ 0.72
NR1H3-228ENST00000525441 SFPQP23246 707 aaKnown RBP eCLIP19.55■□□□□ 0.72
NR1H3-228ENST00000525441 TECP42680 631 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 DSC3Q14574 896 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 ZNF579Q8NAF0 562 aaKnown RBP19.55■□□□□ 0.72
NR1H3-228ENST00000525441 NLRP4Q96MN2 994 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 FDXACB1Q9BRP7 624 aaPredicted RBP19.55■□□□□ 0.72
NR1H3-228ENST00000525441 TUFT1Q9NNX1 390 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 COL4A3BPQ9Y5P4 624 aa19.55■□□□□ 0.72
NR1H3-228ENST00000525441 ASAP2O43150 1006 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 RB1P06400 928 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 CTNNB1P35222 781 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 PTPROQ16827 1216 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 CLP1Q92989 425 aaKnown RBP19.54■□□□□ 0.72
NR1H3-228ENST00000525441 TMEM143Q96AN5 459 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 MTRQ99707 1265 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 ELAC1Q9H777 363 aaKnown RBP19.54■□□□□ 0.72
NR1H3-228ENST00000525441 ATP6V0A4Q9HBG4 840 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 TMEM161AQ9NX61 479 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 DACT1Q9NYF0 836 aa19.54■□□□□ 0.72
NR1H3-228ENST00000525441 H3BNC9 293 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 LAD1O00515 517 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 ZBTB39O15060 712 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 HOXA2O43364 376 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 DGAT1O75907 488 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 BMPR1AP36894 532 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 FAM189BP81408 668 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 GPM6BQ13491 265 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 SKIV2LQ15477 1246 aaKnown RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 RILPL1Q5EBL4 403 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 LARP1BQ659C4 914 aaKnown RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 HAUS3Q68CZ6 603 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 PRPF31Q8WWY3 499 aaKnown RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 C11orf84Q9BUA3 381 aaPredicted RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 POLR3CQ9BUI4 534 aaPredicted RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 RAB34Q9BZG1 259 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 CHST12Q9NRB3 414 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 BMP2KQ9NSY1 1161 aaPredicted RBP19.53■□□□□ 0.72
NR1H3-228ENST00000525441 THEGQ9P2T0 379 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 STK24Q9Y6E0 443 aa19.53■□□□□ 0.72
NR1H3-228ENST00000525441 C5orf67F2Z3F1 127 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 SPATA31C1P0DKV0 1188 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 FGFR4P22455 802 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 RARRES1P49788 294 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 TOB1P50616 345 aaPredicted RBP19.52■□□□□ 0.72
NR1H3-228ENST00000525441 FXR2P51116 673 aaKnown RBP eCLIP19.52■□□□□ 0.72
NR1H3-228ENST00000525441 PTGDRQ13258 359 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 MXD4Q14582 209 aaPredicted RBP19.52■□□□□ 0.72
NR1H3-228ENST00000525441 NBR1Q14596 966 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 PAN2Q504Q3 1202 aaKnown RBP19.52■□□□□ 0.72
NR1H3-228ENST00000525441 CATSPER3Q86XQ3 398 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 KSR1Q8IVT5 923 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 C4orf32Q8N8J7 132 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 NACC1Q96RE7 527 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 PLVAPQ9BX97 442 aa19.52■□□□□ 0.72
NR1H3-228ENST00000525441 PCDHB6Q9Y5E3 794 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms