RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CXXC1Q9P0U4 656 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 SERTAD1Q9UHV2 236 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 DBR1Q9UK59 544 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 CFAP45Q9UL16 551 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 NOC2LQ9Y3T9 749 aaKnown RBP5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 TRPV2Q9Y5S1 764 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 COL1A2P08123 1366 aa5.12□□□□□ -1.59
CHMP4A-202ENST00000524955 ALPK3Q96L96 1907 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 IGKV6-21A0A0C4DH24 114 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 LRRIQ4A6NIV6 560 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TTLL13PA6NNM8 815 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 M0QZ92 97 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PITPNM1O00562 1244 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MAGEB2O15479 319 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 POLR2DO15514 142 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MGEA5O60502 916 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 GPR32O75388 356 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 UPP2O95045 317 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 FGBP02675 491 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 KRT18P05783 430 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PRR29P0C7W0 189 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MYOGP15173 224 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PFKFB1P16118 471 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 CYP11B2P19099 503 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 GLRA2P23416 452 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TMOD1P28289 359 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TXLNAP40222 546 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RFC5P40937 340 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 STAT6P42226 847 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 AFMP43652 599 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 DNM2P50570 870 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 GPC3P51654 580 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 NDUFA8P51970 172 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RABGGTBP53611 331 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 SLC12A3P55017 1021 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PEX3P56589 373 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 DEFB103AP81534 67 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 LAMTOR4Q0VGL1 99 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MAPK7Q13164 816 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PPIGQ13427 754 aaKnown RBP eCLIP5.11□□□□□ -1.596e-10■■□□□ 12.5
CHMP4A-202ENST00000524955 CAPSQ13938 189 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 ARSHQ5FYA8 562 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 FBXO47Q5MNV8 452 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TMEM240Q5SV17 173 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 HYIQ5T013 277 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 IER5Q5VY09 327 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RESP18Q5W5W9 173 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RINT1Q6NUQ1 792 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TAF2Q6P1X5 1199 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RSPH3Q86UC2 560 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 FAM228AQ86W67 206 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 DAW1Q8N136 415 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 SYT2Q8N9I0 419 aaPredicted RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 FSIP1Q8NA03 581 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RNF149Q8NC42 400 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 CAGE1Q8TC20 777 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 KCNG4Q8TDN1 519 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 ERCC4Q92889 916 aaPredicted RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 HPS3Q969F9 1004 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 CPB2Q96IY4 423 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RNPC3Q96LT9 517 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 AK8Q96MA6 479 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MAP7D2Q96T17 732 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 CCSER1Q9C0I3 900 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 IKZF4Q9H2S9 585 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 ATP6V0A4Q9HBG4 840 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 IL23AQ9NPF7 189 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 RNF19AQ9NV58 838 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TBC1D7Q9P0N9 293 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 CCDC39Q9UFE4 941 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 PADI3Q9ULW8 664 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 ATP6V1DQ9Y5K8 247 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 COL4A3BPQ9Y5P4 624 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 KDM3AQ9Y4C1 1321 aa5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 TNRC18O15417 2968 aaPredicted RBP5.11□□□□□ -1.59
CHMP4A-202ENST00000524955 MYMKA6NI61 221 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 CCDC169A6NNP5 214 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 INO80B-WBP1J3KQ70 363 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 TULP1O00294 542 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SOX1O00570 391 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 SLC16A4O15374 487 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 B4GALT5O43286 388 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 PRPF40AO75400 957 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 RPS6KA5O75582 802 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 DGAT1O75907 488 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 EDN1P05305 212 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 PDIA4P13667 645 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 IDEP14735 1019 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 DARSP14868 501 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 NMT1P30419 496 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ARL2P36404 184 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 PBX2P40425 430 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 GATMP50440 423 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 CRYBB1P53674 252 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 RBL2Q08999 1139 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 PAK2Q13177 524 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 GIT2Q14161 759 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 E2F4Q16254 413 aa5.1□□□□□ -1.59
CHMP4A-202ENST00000524955 ZC2HC1CQ53FD0 456 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms