RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 COG5Q9UP83 839 aa14.29□□□□□ -0.12
CAPN1-202ENST00000524773 STK38LQ9Y2H1 464 aa14.29□□□□□ -0.12
CAPN1-202ENST00000524773 TNIP1Q15025 636 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 EPHA7Q15375 998 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 ZKSCAN8Q15776 578 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 WLSQ5T9L3 541 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 FAM129AQ9BZQ8 928 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 RGL1Q9NZL6 768 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 EP400Q96L91 3159 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 LAMB1P07942 1786 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 PMS2P54278 862 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 POU5F1Q01860 360 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 SPICE1Q8N0Z3 855 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 ZNF317Q96PQ6 595 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 RUSC1Q9BVN2 902 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 DHX36Q9H2U1 1008 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 A1CFQ9NQ94 594 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 PPIP5K2O43314 1243 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 EZRP15311 586 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 TM4SF1P30408 202 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 NMT1P30419 496 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 GIT2Q14161 759 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 ATXN2LQ8WWM7 1075 aaKnown RBP14.28□□□□□ -0.12
CAPN1-202ENST00000524773 SLC35C1Q96A29 364 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 MTMR4Q9NYA4 1195 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 CTNNAL1Q9UBT7 734 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 DAAM1Q9Y4D1 1078 aa14.28□□□□□ -0.12
CAPN1-202ENST00000524773 RREB1Q92766 1687 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 C5orf60A6NFR6 353 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 RGS16O15492 202 aaPredicted RBP14.27□□□□□ -0.12
CAPN1-202ENST00000524773 NR3C1P04150 777 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 SLC12A3P55017 1021 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 PPP2R5AQ15172 486 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 LONRF1Q17RB8 773 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 KNOP1Q1ED39 458 aaKnown RBP14.27□□□□□ -0.12
CAPN1-202ENST00000524773 ANKRD42Q8N9B4 389 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 CCDC63Q8NA47 563 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 GDAP1Q8TB36 358 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 SLC20A1Q8WUM9 679 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 TLCD1Q96CP7 247 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 HES6Q96HZ4 224 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 PWWP2AQ96N64 755 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.12
CAPN1-202ENST00000524773 PNMA3Q9UL41 463 aa14.27□□□□□ -0.12
CAPN1-202ENST00000524773 DDX3YO15523 660 aaKnown RBP14.27□□□□□ -0.13
CAPN1-202ENST00000524773 UBOX5O94941 541 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 RPL21P46778 160 aaKnown RBP14.27□□□□□ -0.13
CAPN1-202ENST00000524773 CYP2J2P51589 502 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 XRCC4Q13426 336 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 MTMR3Q13615 1198 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 USH1GQ495M9 461 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 DENND2CQ68D51 928 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 ZDHHC24Q6UX98 284 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 CLEC4GQ6UXB4 293 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 JAMLQ86YT9 394 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 DDX23Q9BUQ8 820 aaKnown RBP14.27□□□□□ -0.13
CAPN1-202ENST00000524773 ANKRD2Q9GZV1 360 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 ZDHHC18Q9NUE0 388 aa14.27□□□□□ -0.13
CAPN1-202ENST00000524773 TRPC5Q9UL62 973 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-202ENST00000524773 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CHMP2AO43633 222 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 GNA14O95837 355 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 DRAP1Q14919 205 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CBWD6Q4V339 395 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CBWD3Q5JTY5 395 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CBWD5Q5RIA9 395 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 TTC27Q6P3X3 843 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 WDR66Q8TBY9 1149 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CUL5Q93034 780 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 ERP44Q9BS26 406 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 USP40Q9NVE5 1235 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 SUCLA2Q9P2R7 463 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 ASTN1O14525 1302 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 ACSL3O95573 720 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 KLRC3Q07444 240 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 TRIP13Q15645 432 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 MFSD14BQ5SR56 506 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 RASGEF1CQ8N431 466 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 C1orf131Q8NDD1 294 aaKnown RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 OLIG1Q8TAK6 271 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 KCNV2Q8TDN2 545 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 AGAP11Q8TF27 550 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CALR3Q96L12 384 aaKnown RBP14.26□□□□□ -0.13
CAPN1-202ENST00000524773 FGFR1OP2Q9NVK5 253 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 UTRNP46939 3433 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CNTNAP4Q9C0A0 1308 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
CAPN1-202ENST00000524773 CCDC188H7C350 402 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 MGRN1O60291 552 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 PPFIA2O75334 1257 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 GH1P01241 217 aa14.25□□□□□ -0.13
CAPN1-202ENST00000524773 MYBL1P10243 752 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms