RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 ERVK-5Q9HDB9 667 aa13.95□□□□□ -0.18
CCNC-216ENST00000523961 KIAA1024Q9UPX6 916 aa13.95□□□□□ -0.18
CCNC-216ENST00000523961 NOC2LQ9Y3T9 749 aaKnown RBP13.95□□□□□ -0.18
CCNC-216ENST00000523961 PCDHA11Q9Y5I1 949 aa13.95□□□□□ -0.18
CCNC-216ENST00000523961 SIP14410 1827 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 TMEM265A0A087WTH1 108 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 ARHGEF35A5YM69 484 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 SLC26A4O43511 780 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 DARSP14868 501 aaKnown RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 CDC25AP30304 524 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 LONP1P36776 959 aaKnown RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 PTPAQ15257 358 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 ECM1Q16610 540 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCNC-216ENST00000523961 MYOCDQ8IZQ8 938 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 TIFAQ96CG3 184 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 ZNF668Q96K58 619 aaPredicted RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 ZNF396Q96N95 335 aaPredicted RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 USP28Q96RU2 1077 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 NT5C3AQ9H0P0 336 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 XPNPEP1Q9NQW7 623 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 DDX19AQ9NUU7 478 aaKnown RBP13.94□□□□□ -0.18
CCNC-216ENST00000523961 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 COL4A3BPQ9Y5P4 624 aa13.94□□□□□ -0.18
CCNC-216ENST00000523961 A0A087WZ62 844 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 ENPP3O14638 875 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 F13A1P00488 732 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 PBX2P40425 430 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 RABGGTBP53611 331 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 LAMTOR4Q0VGL1 99 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 MXD4Q14582 209 aaPredicted RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 HYIQ5T013 277 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 ZNF697Q5TEC3 545 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 FOXD4L5Q5VV16 416 aaPredicted RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 PADI6Q6TGC4 694 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 FAM228AQ86W67 206 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 MCPH1Q8NEM0 835 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 FOXD4L4Q8WXT5 416 aaPredicted RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 NLRP4Q96MN2 994 aa13.93□□□□□ -0.18
CCNC-216ENST00000523961 FDXACB1Q9BRP7 624 aaPredicted RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
CCNC-216ENST00000523961 MICAL3Q7RTP6 2002 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 TLL1O43897 1013 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 GJB5O95377 273 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 EYA4O95677 639 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 CYP11B2P19099 503 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 MARCKSP29966 332 aaPredicted RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 UBA7P41226 1012 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 NASPP49321 788 aaPredicted RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 TFDP1Q14186 410 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 CABP7Q86V35 215 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 KSR1Q8IVT5 923 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 TOP1MTQ969P6 601 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 RAD9AQ99638 391 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 BHMT2Q9H2M3 363 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 TMX1Q9H3N1 280 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 YBX2Q9Y2T7 364 aaKnown RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
CCNC-216ENST00000523961 ARID2Q68CP9 1835 aa13.92□□□□□ -0.18
CCNC-216ENST00000523961 DENND3A2RUS2 1198 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 SFPQP23246 707 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCNC-216ENST00000523961 ARL2P36404 184 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 GRIN1Q05586 938 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 POU5F1BQ06416 359 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 GRB10Q13322 594 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 PKP1Q13835 747 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 STK38Q15208 465 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 ATL3Q6DD88 541 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 FAM117BQ6P1L5 589 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 SRGAP1Q7Z6B7 1085 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 TMCO2Q7Z6W1 182 aaPredicted RBP13.91□□□□□ -0.18
CCNC-216ENST00000523961 RTN4RL1Q86UN2 441 aaPredicted RBP13.91□□□□□ -0.18
CCNC-216ENST00000523961 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 ADAM2Q99965 735 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
CCNC-216ENST00000523961 NKX2-4Q9H2Z4 354 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 SLC28A3Q9HAS3 691 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 C1orf112Q9NSG2 853 aa13.91□□□□□ -0.18
CCNC-216ENST00000523961 TFIP11Q9UBB9 837 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms