RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DARSP14868 501 aaKnown RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 DNAJB2P25686 324 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 POU5F1BQ06416 359 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 FAM228AQ86W67 206 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 RHPN2Q8IUC4 686 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 TMEM40Q8WWA1 233 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 USP28Q96RU2 1077 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 PBX4Q9BYU1 374 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 CDHR5Q9HBB8 845 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 XPNPEP1Q9NQW7 623 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 DDX19AQ9NUU7 478 aaKnown RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 KIAA1024Q9UPX6 916 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 DNM3Q9UQ16 869 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 NOC2LQ9Y3T9 749 aaKnown RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 CLIC4Q9Y696 253 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 COL4A6Q14031 1691 aa13.97□□□□□ -0.17
VEGFA-225ENST00000523950 RANBP2P49792 3224 aaKnown RBP13.97□□□□□ -0.17
VEGFA-225ENST00000523950 PP2D1A8MPX8 630 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 GJB5O95377 273 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 EYA4O95677 639 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 SFPQP23246 707 aaKnown RBP eCLIP13.96□□□□□ -0.17
VEGFA-225ENST00000523950 UBA7P41226 1012 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 DEFB103AP81534 67 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 NFX1Q12986 1120 aaKnown RBP13.96□□□□□ -0.17
VEGFA-225ENST00000523950 TFDP1Q14186 410 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 SLC39A14Q15043 492 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.174e-7■■□□□ 11.7
VEGFA-225ENST00000523950 ECM1Q16610 540 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 ZNF697Q5TEC3 545 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 FAM173BQ6P4H8 233 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.96□□□□□ -0.172e-35■■■■□ 25.1
VEGFA-225ENST00000523950 SPRYD3Q8NCJ5 442 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 PRPF31Q8WWY3 499 aaKnown RBP13.96□□□□□ -0.17
VEGFA-225ENST00000523950 TOP1MTQ969P6 601 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 TIFAQ96CG3 184 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 CALML4Q96GE6 196 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 CDK5RAP3Q96JB5 506 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 NLRP4Q96MN2 994 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 TSPYL2Q9H2G4 693 aaPredicted RBP13.96□□□□□ -0.17
VEGFA-225ENST00000523950 C1orf112Q9NSG2 853 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 ST3GAL5Q9UNP4 418 aa13.96□□□□□ -0.17
VEGFA-225ENST00000523950 SRPRBQ9Y5M8 271 aaKnown RBP13.96□□□□□ -0.17
VEGFA-225ENST00000523950 TTC3P53804 2025 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 A0A087WZ62 844 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-225ENST00000523950 GRXCR1A8MXD5 290 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 ENPP3O14638 875 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 USO1O60763 962 aaKnown RBP13.95□□□□□ -0.18
VEGFA-225ENST00000523950 YEATS4O95619 227 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 CYP11B2P19099 503 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 ARL2P36404 184 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 LAMTOR4Q0VGL1 99 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 PADI6Q6TGC4 694 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 SRGAP1Q7Z6B7 1085 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 CABP7Q86V35 215 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-225ENST00000523950 MYOCDQ8IZQ8 938 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 TMEM143Q96AN5 459 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 PPP1R16BQ96T49 567 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 RAD9AQ99638 391 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 FDXACB1Q9BRP7 624 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-225ENST00000523950 NFKBIZQ9BYH8 718 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 CCSER1Q9C0I3 900 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 BHMT2Q9H2M3 363 aa13.95□□□□□ -0.18
VEGFA-225ENST00000523950 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
VEGFA-225ENST00000523950 TLL1O43897 1013 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 PPP6R2O75170 966 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 BRD1O95696 1058 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 CDC25AP30304 524 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 TXLNAP40222 546 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 PBX2P40425 430 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 PHKA2P46019 1235 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 STK38Q15208 465 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 TMEM119Q4V9L6 283 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 LINC00301Q8NCQ3 95 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 LINC01599Q8WXQ3 324 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 PNMA5Q96PV4 448 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 ZBED2Q9BTP6 218 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 TIPINQ9BVW5 301 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 POLR3FQ9H1D9 316 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-225ENST00000523950 TMX1Q9H3N1 280 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 CHST12Q9NRB3 414 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 RGS18Q9NS28 235 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
VEGFA-225ENST00000523950 KCND2Q9NZV8 630 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 CFAP45Q9UL16 551 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 INSL6Q9Y581 213 aa13.94□□□□□ -0.18
VEGFA-225ENST00000523950 DENND3A2RUS2 1198 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 E9PMD0 336 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 STAG3L1P0CL83 205 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 ZSCAN20P17040 1043 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 SARSP49591 514 aaKnown RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 RABGGTBP53611 331 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 HTRA4P83105 476 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 GRB10Q13322 594 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms