RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CLLU1OSQ5K130 101 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 CASP10Q92851 521 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 SPG21Q9NZD8 308 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 GABBR1Q9UBS5 961 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 AKT3Q9Y243 479 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 HCFC2Q9Y5Z7 792 aa25.76■■□□□ 1.71
PVT1-218ENST00000523328 GFRA3O60609 400 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 ZSCAN20P17040 1043 aaPredicted RBP25.75■■□□□ 1.71
PVT1-218ENST00000523328 EIF4BP23588 611 aaKnown RBP25.75■■□□□ 1.71
PVT1-218ENST00000523328 PFKFB3Q16875 520 aaPredicted RBP25.75■■□□□ 1.71
PVT1-218ENST00000523328 RNF20Q5VTR2 975 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 EFCAB12Q6NXP0 572 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 DHX32Q7L7V1 743 aaKnown RBP25.75■■□□□ 1.71
PVT1-218ENST00000523328 ZBTB33Q86T24 672 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 ABI1Q8IZP0 508 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 SLC39A11Q8N1S5 342 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 LRRC71Q8N4P6 559 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 MRPL43Q8N983 215 aaKnown RBP25.75■■□□□ 1.71
PVT1-218ENST00000523328 IRF2BPLQ9H1B7 796 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 POMKQ9H5K3 350 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 NR2E1Q9Y466 385 aa25.75■■□□□ 1.71
PVT1-218ENST00000523328 ESYT2A0FGR8 921 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 C2orf71A6NGG8 1288 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 KREMEN2Q8NCW0 462 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 ATOH1Q92858 354 aaPredicted RBP25.74■■□□□ 1.71
PVT1-218ENST00000523328 MAP7D2Q96T17 732 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 ZMYND12Q9H0C1 365 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 ADAM7Q9H2U9 754 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 MYO15AQ9UKN7 3530 aa25.74■■□□□ 1.71
PVT1-218ENST00000523328 KLF18A0A0U1RQI7 1052 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 RCAN1P53805 252 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 ITIH3Q06033 890 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 SMC1AQ14683 1233 aaKnown RBP25.73■■□□□ 1.71
PVT1-218ENST00000523328 ADCK5Q3MIX3 580 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 TPRNQ4KMQ1 711 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 ZNF598Q86UK7 904 aaKnown RBP25.73■■□□□ 1.71
PVT1-218ENST00000523328 ZNF710Q8N1W2 664 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 ZNF668Q96K58 619 aaPredicted RBP25.73■■□□□ 1.71
PVT1-218ENST00000523328 FAM167AQ96KS9 214 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 TSHZ2Q9NRE2 1034 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 SORCS3Q9UPU3 1222 aa25.73■■□□□ 1.71
PVT1-218ENST00000523328 A0A0U1RQF3 1178 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 C2CD4DB7Z1M9 353 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 H0Y858 1186 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 ZNF862O60290 1169 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 BRD1O95696 1058 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 TMOD1P28289 359 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 ADD1P35611 737 aaKnown RBP25.72■■□□□ 1.71
PVT1-218ENST00000523328 GPC3P51654 580 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 NUBP1P53384 320 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 RASEFQ8IZ41 740 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 RNF169Q8NCN4 708 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 LENG9Q96B70 501 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 NECTIN4Q96NY8 510 aa25.72■■□□□ 1.71
PVT1-218ENST00000523328 CLASP2O75122 1294 aaKnown RBP25.71■■□□□ 1.71
PVT1-218ENST00000523328 DARSP14868 501 aaKnown RBP25.71■■□□□ 1.71
PVT1-218ENST00000523328 CIITAP33076 1130 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 MTMR3Q13615 1198 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 TSGA10IPQ3SY00 556 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 PRR16Q569H4 304 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 CES5AQ6NT32 575 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 UBALD2Q8IYN6 164 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 REXO1Q8N1G1 1221 aaKnown RBP25.71■■□□□ 1.71
PVT1-218ENST00000523328 HELQQ8TDG4 1101 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 TCEAL9Q9UHQ7 104 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 SAMM50Q9Y512 469 aa25.71■■□□□ 1.71
PVT1-218ENST00000523328 PTPRZ1P23471 2315 aaPredicted RBP25.7■■□□□ 1.71
PVT1-218ENST00000523328 GALR2O43603 387 aaPredicted RBP25.7■■□□□ 1.7
PVT1-218ENST00000523328 EOMESO95936 686 aa25.7■■□□□ 1.7
PVT1-218ENST00000523328 OATP04181 439 aa25.7■■□□□ 1.7
PVT1-218ENST00000523328 FGFR4P22455 802 aa25.7■■□□□ 1.7
PVT1-218ENST00000523328 MCTP2Q6DN12 878 aa25.7■■□□□ 1.7
PVT1-218ENST00000523328 C6orf50Q9HD87 102 aa25.7■■□□□ 1.7
PVT1-218ENST00000523328 WDR64B1ANS9 1081 aa25.69■■□□□ 1.7
PVT1-218ENST00000523328 NT5C1B-RDH14C9J2C7 533 aa25.69■■□□□ 1.7
PVT1-218ENST00000523328 METAP2P50579 478 aaKnown RBP eCLIP25.69■■□□□ 1.7
PVT1-218ENST00000523328 IRX6P78412 446 aaPredicted RBP25.69■■□□□ 1.7
PVT1-218ENST00000523328 PRKCEQ02156 737 aa25.69■■□□□ 1.7
PVT1-218ENST00000523328 SMOC2Q9H3U7 446 aa25.69■■□□□ 1.7
PVT1-218ENST00000523328 DISC1Q9NRI5 854 aa25.69■■□□□ 1.7
PVT1-218ENST00000523328 PROB1E7EW31 1015 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 EDIL3O43854 480 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 MTHFRP42898 656 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 BCAR1P56945 870 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 UGCGQ16739 394 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 MRPL9Q9BYD2 267 aaKnown RBP25.68■■□□□ 1.7
PVT1-218ENST00000523328 NRBP2Q9NSY0 501 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 DENND4AQ7Z401 1863 aa25.68■■□□□ 1.7
PVT1-218ENST00000523328 CSDE1O75534 798 aaKnown RBP25.67■■□□□ 1.7
PVT1-218ENST00000523328 WEE2P0C1S8 567 aa25.67■■□□□ 1.7
PVT1-218ENST00000523328 ALDH7A1P49419 539 aaKnown RBP25.67■■□□□ 1.7
PVT1-218ENST00000523328 RIF1Q5UIP0 2472 aaKnown RBP25.67■■□□□ 1.7
PVT1-218ENST00000523328 TMEM173Q86WV6 379 aaPredicted RBP25.67■■□□□ 1.7
PVT1-218ENST00000523328 TMEM105Q8N8V8 129 aa25.67■■□□□ 1.7
PVT1-218ENST00000523328 CCDC12Q8WUD4 166 aaPredicted RBP25.67■■□□□ 1.7
PVT1-218ENST00000523328 ZBP1Q9H171 429 aa25.67■■□□□ 1.7
PVT1-218ENST00000523328 DACT1Q9NYF0 836 aa25.67■■□□□ 1.7
PVT1-218ENST00000523328 CXCL14O95715 111 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 GNA11P29992 359 aa25.66■■□□□ 1.7
PVT1-218ENST00000523328 DRP2Q13474 957 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms