RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ALG13Q9NP73 1137 aaKnown RBP20.97■□□□□ 0.95
SPIDR-220ENST00000522900 RWDD3Q9Y3V2 267 aa20.97■□□□□ 0.95
SPIDR-220ENST00000522900 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.96■□□□□ 0.95
SPIDR-220ENST00000522900 ZBTB39O15060 712 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 BAG4O95429 457 aaKnown RBP20.96■□□□□ 0.95
SPIDR-220ENST00000522900 FAM43BQ6ZT52 329 aaPredicted RBP20.96■□□□□ 0.95
SPIDR-220ENST00000522900 IL27Q8NEV9 243 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 DYDC2Q96IM9 177 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 SCLT1Q96NL6 688 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 C11orf84Q9BUA3 381 aaPredicted RBP20.96■□□□□ 0.95
SPIDR-220ENST00000522900 CYP26B1Q9NR63 512 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 SUCLA2Q9P2R7 463 aaPredicted RBP20.96■□□□□ 0.95
SPIDR-220ENST00000522900 HCSTQ9UBK5 93 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 PLAGL2Q9UPG8 496 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 WDR81Q562E7 1941 aa20.96■□□□□ 0.95
SPIDR-220ENST00000522900 A0A087WZ62 844 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 TBKBP1A7MCY6 615 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 CSPG5O95196 566 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 FGFR1P11362 822 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 CAMK1Q14012 370 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 CTTNQ14247 550 aaKnown RBP20.95■□□□□ 0.94
SPIDR-220ENST00000522900 KSR1Q8IVT5 923 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 SLFN12Q8IYM2 578 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 ZNF710Q8N1W2 664 aa20.95■□□□□ 0.94
SPIDR-220ENST00000522900 UHRF1Q96T88 793 aaPredicted RBP20.95■□□□□ 0.94
SPIDR-220ENST00000522900 FDXACB1Q9BRP7 624 aaPredicted RBP20.95■□□□□ 0.94
SPIDR-220ENST00000522900 UBE2ZQ9H832 354 aaPredicted RBP20.95■□□□□ 0.94
SPIDR-220ENST00000522900 TNFRSF10AO00220 468 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 ATP2B1P20020 1258 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 DNAJB1P25685 340 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 DNM2P50570 870 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 CYP4A11Q02928 519 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 CALCRLQ16602 461 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 RHPN2Q8IUC4 686 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 C4orf19Q8IY42 314 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 KLHL23Q8NBE8 558 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 CEP170P1Q96L14 293 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 ZSCAN31Q96LW9 406 aaPredicted RBP20.94■□□□□ 0.94
SPIDR-220ENST00000522900 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
SPIDR-220ENST00000522900 LXNQ9BS40 222 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 PLVAPQ9BX97 442 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 GCOM2Q9BZD3 368 aaPredicted RBP20.94■□□□□ 0.94
SPIDR-220ENST00000522900 ATP6V0A4Q9HBG4 840 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 RNF19AQ9NV58 838 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 TMEM161AQ9NX61 479 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 PCDHA12Q9UN75 941 aa20.94■□□□□ 0.94
SPIDR-220ENST00000522900 SLITRK3O94933 977 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 ITGB1P05556 798 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 ZSCAN20P17040 1043 aaPredicted RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 RBM25P49756 843 aaKnown RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 TIGD5Q53EQ6 642 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 TPH2Q8IWU9 490 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 SPPL3Q8TCT6 385 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 P2RX5Q93086 422 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 C8orf76Q96K31 380 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 MTMR9Q96QG7 549 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 EIF2AK1Q9BQI3 630 aaKnown RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 TMEM60Q9H2L4 133 aa20.93■□□□□ 0.94
SPIDR-220ENST00000522900 NSUN3Q9H649 340 aaKnown RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 ELAC1Q9H777 363 aaKnown RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 TTC12Q9H892 705 aaPredicted RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 BMP2KQ9NSY1 1161 aaPredicted RBP20.93■□□□□ 0.94
SPIDR-220ENST00000522900 DKC1O60832 514 aaKnown RBP eCLIP20.92■□□□□ 0.94
SPIDR-220ENST00000522900 KCNA5P22460 613 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 YWHABP31946 246 aaKnown RBP20.92■□□□□ 0.94
SPIDR-220ENST00000522900 TXKP42681 527 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 ECHDC2Q86YB7 292 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 TMEM143Q96AN5 459 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 LMAN2LQ9H0V9 348 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 ZSWIM4Q9H7M6 989 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 TYW1Q9NV66 732 aaKnown RBP20.92■□□□□ 0.94
SPIDR-220ENST00000522900 NLRC5Q86WI3 1866 aa20.92■□□□□ 0.94
SPIDR-220ENST00000522900 NEMFO60524 1076 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 MCM7P33993 719 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 CDC42EP1Q00587 391 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 SAFBQ15424 915 aaKnown RBP eCLIP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 LRRC55Q6ZSA7 311 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 PRPF31Q8WWY3 499 aaKnown RBP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 NLRP4Q96MN2 994 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 CASD1Q96PB1 797 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 HSD17B14Q9BPX1 270 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 DHX33Q9H6R0 707 aaKnown RBP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 CWH43Q9H720 699 aa20.91■□□□□ 0.94
SPIDR-220ENST00000522900 SH2B1Q9NRF2 756 aaPredicted RBP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
SPIDR-220ENST00000522900 RALGAPA2Q2PPJ7 1873 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 A0A087WWV3 80 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 GTF2F1P35269 517 aaKnown RBP eCLIP20.9■□□□□ 0.94
SPIDR-220ENST00000522900 IRS1P35568 1242 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 POLGP54098 1239 aaPredicted RBP20.9■□□□□ 0.94
SPIDR-220ENST00000522900 HYAL1Q12794 435 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 NAALADL2Q58DX5 795 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 XKR9Q5GH70 373 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 SPOUT1Q5T280 376 aaKnown RBP20.9■□□□□ 0.94
SPIDR-220ENST00000522900 ZNF410Q86VK4 478 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 RNF169Q8NCN4 708 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 FBXO18Q8NFZ0 1043 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 SLC7A3Q8WY07 619 aa20.9■□□□□ 0.94
SPIDR-220ENST00000522900 JPH2Q9BR39 696 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms