RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-205ENST00000522240 MAPTP10636 758 aaKnown RBP14.45□□□□□ -0.1
CPNE3-205ENST00000522240 ERCC5P28715 1186 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-205ENST00000522240 ZNF165P49910 485 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
CPNE3-205ENST00000522240 TBC1D8BQ0IIM8 1120 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 HERC4Q5GLZ8 1057 aaPredicted RBP14.45□□□□□ -0.1
CPNE3-205ENST00000522240 KIAA0895Q8NCT3 520 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 SLC17A8Q8NDX2 589 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 SH2D3AQ9BRG2 576 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 PCDHA2Q9Y5H9 948 aa14.45□□□□□ -0.1
CPNE3-205ENST00000522240 SCN10AQ9Y5Y9 1956 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 IGKV6-21A0A0C4DH24 114 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 MYADML2A6NDP7 307 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 PPP1R3GB7ZBB8 358 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 EIF3DO15371 548 aaKnown RBP eCLIP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 MAFO75444 373 aaPredicted RBP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 KIF20AO95235 890 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 MYL3P08590 195 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 PLS3P13797 630 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 PSEN2P49810 448 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 BEX3Q00994 111 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 STK4Q13043 487 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 ALCAMQ13740 583 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 TRMT1LQ7Z2T5 733 aaKnown RBP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 SMYD4Q8IYR2 804 aaPredicted RBP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 ADSSL1Q8N142 457 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 GUF1Q8N442 669 aaKnown RBP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 KLHDC9Q8NEP7 349 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 KAT2BQ92831 832 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 MTG1Q9BT17 334 aaPredicted RBP14.44□□□□□ -0.1
CPNE3-205ENST00000522240 TMEM106CQ9BVX2 250 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 RNPEPQ9H4A4 650 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
CPNE3-205ENST00000522240 KIAA0100Q14667 2235 aaKnown RBP14.43□□□□□ -0.1
CPNE3-205ENST00000522240 GOLGA6L3A6NEY3 463 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 RRN3P2A6NIE6 340 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 PSMA7O14818 248 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 IKBKBO14920 756 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 MAGEB2O15479 319 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 INSRRP14616 1297 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 SCP2P22307 547 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 PPFIA1Q13136 1202 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 MFSD10Q14728 455 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 BMT2Q1RMZ1 405 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 SLC9C1Q4G0N8 1177 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 ODR4Q5SWX8 454 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 FAM102BQ5T8I3 360 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 FOXR2Q6PJQ5 311 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 STXBP4Q6ZWJ1 553 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 RNF180Q86T96 592 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 FAM178BQ8IXR5 827 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 MYCT1Q8N699 235 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 PCSK9Q8NBP7 692 aaKnown RBP14.43□□□□□ -0.1
CPNE3-205ENST00000522240 SPIRE2Q8WWL2 714 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 TCP11Q8WWU5 503 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 KCNN1Q92952 543 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 FIZ1Q96SL8 496 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.43□□□□□ -0.1
CPNE3-205ENST00000522240 POLR3FQ9H1D9 316 aaPredicted RBP14.43□□□□□ -0.1
CPNE3-205ENST00000522240 ST6GALNAC4Q9H4F1 302 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 CBX8Q9HC52 389 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 SLC39A2Q9NP94 309 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 KCNG1Q9UIX4 513 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 SIP14410 1827 aa14.43□□□□□ -0.1
CPNE3-205ENST00000522240 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 H0YCG3 227 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 C22orf31O95567 290 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 PGK1P00558 417 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 HOXC8P31273 242 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 ABCD1P33897 745 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 PRCPP42785 496 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 NCKAP1LP55160 1127 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 IRX5P78411 483 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 MYL5Q02045 173 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 PAK1Q13153 545 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 DMP1Q13316 513 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 IQCB1Q15051 598 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 PPP2R5AQ15172 486 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 GRIK4Q16099 956 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 GNASQ5JWF2 1037 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 IER5Q5VY09 327 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 CCSAPQ6IQ19 270 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 EPM2AIP1Q7L775 607 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 MYOCDQ8IZQ8 938 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 LINC01465Q8N7H1 131 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 RETREG2Q8NC44 543 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 SH3TC2Q8TF17 1288 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 HPS3Q969F9 1004 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 HVCN1Q96D96 273 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 DHTKD1Q96HY7 919 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 RBSNQ9H1K0 784 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 MRPL44Q9H9J2 332 aaKnown RBP14.42□□□□□ -0.1
CPNE3-205ENST00000522240 GPRC5CQ9NQ84 441 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 RWDD2AQ9UIY3 292 aa14.42□□□□□ -0.1
CPNE3-205ENST00000522240 MKI67P46013 3256 aaKnown RBP14.41□□□□□ -0.1
CPNE3-205ENST00000522240 SMTNL1A8MU46 457 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 CABYRO75952 493 aa14.41□□□□□ -0.1
CPNE3-205ENST00000522240 SMIM10L2AP0DMW4 78 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms