RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 CDC45O75419 566 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 OATP04181 439 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 HOXB8P17481 243 aaPredicted RBP16.82■□□□□ 0.28
PRKDC-204ENST00000521331 TECP42680 631 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 PTPN5P54829 565 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 SIGLEC14Q08ET2 396 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 ANKRD54Q6NXT1 300 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 ECHDC2Q86YB7 292 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 LENG9Q96B70 501 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 S1PR5Q9H228 398 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 DISC1Q9NRI5 854 aa16.82■□□□□ 0.28
PRKDC-204ENST00000521331 ADAMTS3O15072 1205 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 DARSP14868 501 aaKnown RBP16.81■□□□□ 0.28
PRKDC-204ENST00000521331 SFNP31947 248 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 GPC3P51654 580 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 JAK3P52333 1124 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 PRKCEQ02156 737 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 LRRC55Q6ZSA7 311 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 Q6ZUG5 572 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 CENPQQ7L2Z9 268 aaPredicted RBP16.81■□□□□ 0.28
PRKDC-204ENST00000521331 FBXL16Q8N461 479 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 LRRC71Q8N4P6 559 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 FBXL6Q8N531 539 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 KCNB2Q92953 911 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 BRF1Q92994 677 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 SCLT1Q96NL6 688 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 RIT2Q99578 217 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 RNF19AQ9NV58 838 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 TRIOO75962 3097 aa16.81■□□□□ 0.28
PRKDC-204ENST00000521331 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 ZDBF2Q9HCK1 2354 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
PRKDC-204ENST00000521331 PLXNA4Q9HCM2 1894 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 A0A0U1RQF3 1178 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 HIDE1A8MVS5 230 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 ZNF862O60290 1169 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 GAS7O60861 476 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 EOMESO95936 686 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 USP11P51784 963 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 TBC1D8BQ0IIM8 1120 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 BLOC1S2Q6QNY1 142 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 PRSS33Q8NF86 280 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 CASP10Q92851 521 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 PHKBQ93100 1093 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 JAKMIP1Q96N16 626 aaKnown RBP16.8■□□□□ 0.28
PRKDC-204ENST00000521331 RNF26Q9BY78 433 aaPredicted RBP16.8■□□□□ 0.28
PRKDC-204ENST00000521331 MRPL9Q9BYD2 267 aaKnown RBP16.8■□□□□ 0.28
PRKDC-204ENST00000521331 DACT1Q9NYF0 836 aa16.8■□□□□ 0.28
PRKDC-204ENST00000521331 MSH4O15457 936 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 CPA1P15085 419 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 KCNA4P22459 653 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 CDC42EP1Q00587 391 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 SMC1AQ14683 1233 aaKnown RBP16.79■□□□□ 0.28
PRKDC-204ENST00000521331 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
PRKDC-204ENST00000521331 PTPN21Q16825 1174 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 TPRNQ4KMQ1 711 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 CLLU1OSQ5K130 101 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 LLGL2Q6P1M3 1020 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 SYCE2Q6PIF2 218 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 RNF169Q8NCN4 708 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 RDM1Q8NG50 284 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 NLRP7Q8WX94 980 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 TEKT3Q9BXF9 490 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 NR2E1Q9Y466 385 aa16.79■□□□□ 0.28
PRKDC-204ENST00000521331 WDFY4Q6ZS81 3184 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 CARNS1A5YM72 827 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 CHMP2AO43633 222 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 IFNAR1P17181 557 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 PBX3P40426 434 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 NTRK3Q16288 839 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 IER5LQ5T953 404 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 LRCH2Q5VUJ6 765 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
PRKDC-204ENST00000521331 SLC39A11Q8N1S5 342 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 MRPL43Q8N983 215 aaKnown RBP16.78■□□□□ 0.28
PRKDC-204ENST00000521331 SLC5A5Q92911 643 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 ASIC4Q96FT7 647 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 AGXT2Q9BYV1 514 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 GCOM2Q9BZD3 368 aaPredicted RBP16.78■□□□□ 0.28
PRKDC-204ENST00000521331 C22orf23Q9BZE7 217 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 SH3GLB2Q9NR46 395 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 CHST12Q9NRB3 414 aa16.78■□□□□ 0.28
PRKDC-204ENST00000521331 RPS6KB1P23443 525 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 HSPA4P34932 840 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
PRKDC-204ENST00000521331 ITIH3Q06033 890 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.28
PRKDC-204ENST00000521331 UGCGQ16739 394 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 CES5AQ6NT32 575 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 ZBTB33Q86T24 672 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 HELQQ8TDG4 1101 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 ZNF668Q96K58 619 aaPredicted RBP16.77■□□□□ 0.28
PRKDC-204ENST00000521331 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 APOL5Q9BWW9 433 aa16.77■□□□□ 0.28
PRKDC-204ENST00000521331 SLC26A6Q9BXS9 759 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms