RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 MT-CO1P00395 513 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 MYBL2P10244 700 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 MEOX1P50221 254 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 ERVK-21P61565 698 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 KLF1Q13351 362 aaPredicted RBP6.97□□□□□ -1.29
SKP1-208ENST00000521216 CLUL1Q15846 466 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 FSCN1Q16658 493 aaKnown RBP6.97□□□□□ -1.29
SKP1-208ENST00000521216 ABCB5Q2M3G0 1257 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 SYDE2Q5VT97 1194 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 TMEM200BQ69YZ2 307 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 PGM2L1Q6PCE3 622 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 KLHL36Q8N4N3 616 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 LMBR1Q8WVP7 490 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 DYDC2Q96IM9 177 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 CEP89Q96ST8 783 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 CARD11Q9BXL7 1154 aa6.97□□□□□ -1.29
SKP1-208ENST00000521216 QRSL1Q9H0R6 528 aaKnown RBP6.97□□□□□ -1.29
SKP1-208ENST00000521216 TRIM13O60858 407 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 OPHN1O60890 802 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 ENPP1P22413 925 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 IARSP41252 1262 aaKnown RBP6.96□□□□□ -1.3
SKP1-208ENST00000521216 PPARAQ07869 468 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 EIF4HQ15056 248 aaKnown RBP6.96□□□□□ -1.3
SKP1-208ENST00000521216 PITRM1Q5JRX3 1037 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 SP8Q8IXZ3 490 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 AMOTL1Q8IY63 956 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 ZDHHC14Q8IZN3 488 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 HIST1H2AHQ96KK5 128 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 HIST1H2AJQ99878 128 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 MENTQ9BUN1 341 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 DNAJC28Q9NX36 388 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 DNAI1Q9UI46 699 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 DENND2AQ9ULE3 1009 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 PTPN22Q9Y2R2 807 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 NUMBLQ9Y6R0 609 aa6.96□□□□□ -1.3
SKP1-208ENST00000521216 A0A0A6YYJ9 748 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 C9orf118A6NHY6 69 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 H2AFYO75367 372 aaKnown RBP6.95□□□□□ -1.3
SKP1-208ENST00000521216 SASH1O94885 1247 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 PFKMP08237 780 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 ZNF888P0CJ79 500 aaPredicted RBP6.95□□□□□ -1.3
SKP1-208ENST00000521216 ETV4P43268 484 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 LGALS4P56470 323 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
SKP1-208ENST00000521216 USP10Q14694 798 aaKnown RBP6.95□□□□□ -1.3
SKP1-208ENST00000521216 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.95□□□□□ -1.3
SKP1-208ENST00000521216 TOR2AQ5JU69 321 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 LARP4Q71RC2 724 aaKnown RBP eCLIP6.95□□□□□ -1.33e-6■□□□□ 10.8
SKP1-208ENST00000521216 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 KBTBD2Q8IY47 623 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 CDYL2Q8N8U2 506 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 FEZF2Q8TBJ5 459 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 STAG1Q8WVM7 1258 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 GAB3Q8WWW8 586 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 KATNBL1Q9H079 304 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 KCTD10Q9H3F6 313 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 PRDM12Q9H4Q4 367 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 ZCCHC4Q9H5U6 513 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 LUC7LQ9NQ29 371 aaKnown RBP6.95□□□□□ -1.3
SKP1-208ENST00000521216 MKS1Q9NXB0 559 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 ADAM29Q9UKF5 820 aa6.95□□□□□ -1.3
SKP1-208ENST00000521216 GABRDO14764 452 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 NOBOXO60393 691 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 B4GALT4O60513 344 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 XPAP23025 273 aaPredicted RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 CSF2RBP32927 897 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 GPR3P46089 330 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 CDK17Q00537 523 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 TRIM25Q14258 630 aaKnown RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 PCOLCEQ15113 449 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 BORAQ6PGQ7 559 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 LCNL1Q6ZST4 164 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 RALYLQ86SE5 291 aaKnown RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 REXO1L1PQ8IX06 675 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 MARCH10Q8NA82 808 aaPredicted RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 ASPSCR1Q9BZE9 553 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 PITHD1Q9GZP4 211 aaPredicted RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 WNT8AQ9H1J5 351 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 GOLGA2P5Q9HBQ8 144 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 POLR3BQ9NW08 1133 aaPredicted RBP6.94□□□□□ -1.3
SKP1-208ENST00000521216 DPP7Q9UHL4 492 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 PRSS50Q9UI38 385 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 TMPRSS11EQ9UL52 423 aa6.94□□□□□ -1.3
SKP1-208ENST00000521216 K7ESF4 209 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 MAFO75444 373 aaPredicted RBP6.93□□□□□ -1.3
SKP1-208ENST00000521216 CCND1P24385 295 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 MRE11P49959 708 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 CCT2P78371 535 aaKnown RBP6.93□□□□□ -1.3
SKP1-208ENST00000521216 SRSF2Q01130 221 aaKnown RBP6.93□□□□□ -1.3
SKP1-208ENST00000521216 ADAM15Q13444 863 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 ACAP2Q15057 778 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 PTPN21Q16825 1174 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 ZNF568Q3ZCX4 644 aa6.93□□□□□ -1.3
SKP1-208ENST00000521216 RAX2Q96IS3 184 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms