RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 RTN4RL1Q86UN2 441 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 BANK1Q8NDB2 785 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 SAMD11Q96NU1 681 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 MTMR9Q96QG7 549 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 TGS1Q96RS0 853 aaKnown RBP11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 CEP89Q96ST8 783 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 JPH2Q9BR39 696 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 TSHZ2Q9NRE2 1034 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 SEPT9Q9UHD8 586 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 BRWD1Q9NSI6 2320 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 CHD7Q9P2D1 2997 aa11.67□□□□□ -0.54
TRAPPC9-209ENST00000521167 COL4A6Q14031 1691 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 LINC01553A4QN01 128 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 NEMFO60524 1076 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 MAFO75444 373 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 VTNP04004 478 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 IGFBP4P22692 258 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 CLCN3P51790 818 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 NLRP11P59045 1033 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 MTERF2Q49AM1 385 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ANO5Q75V66 913 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 OTUD6AQ7L8S5 288 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 NEK9Q8TD19 979 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ARNTL2Q8WYA1 636 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 YME1L1Q96TA2 773 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ADAMTS10Q9H324 1103 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ZSWIM4Q9H7M6 989 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 CERS4Q9HA82 394 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ERVK-5Q9HDB9 667 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 LMCD1Q9NZU5 365 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 ST3GAL5Q9UNP4 418 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 AKT3Q9Y243 479 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 NOC2LQ9Y3T9 749 aaKnown RBP11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 FNDC1Q4ZHG4 1894 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC9-209ENST00000521167 CUL9Q8IWT3 2517 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 ARID2Q68CP9 1835 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 SLITRK3O94933 977 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 STAG3L1P0CL83 205 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 EIF4BP23588 611 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 U2AF2P26368 475 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 TXKP42681 527 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 NFX1Q12986 1120 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 KIZQ2M2Z5 673 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 NCAPH2Q6IBW4 605 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 NOSTRINQ8IVI9 506 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 LRRC71Q8N4P6 559 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 TMEM40Q8WWA1 233 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 OSMRQ99650 979 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 HSD17B14Q9BPX1 270 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 BACH2Q9BYV9 841 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 TMX1Q9H3N1 280 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 TTC12Q9H892 705 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 CYP26B1Q9NR63 512 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 RGS18Q9NS28 235 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 C1orf112Q9NSG2 853 aa11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 NOL7Q9UMY1 257 aaKnown RBP11.65□□□□□ -0.54
TRAPPC9-209ENST00000521167 EPOPA6NHQ4 379 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 RFXAPO00287 272 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 DGKIO75912 1065 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 LYPLA2O95372 231 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 ATP2B1P20020 1258 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 MCM7P33993 719 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 RFC5P40937 340 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 GPC3P51654 580 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 TMEM266Q2M3C6 531 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 FAM228AQ86W67 206 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 TPH2Q8IWU9 490 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 FIBCD1Q8N539 461 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 LXNQ9BS40 222 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 RC3H2Q9HBD1 1191 aaKnown RBP11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 RGL1Q9NZL6 768 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 MTCH2Q9Y6C9 303 aa11.64□□□□□ -0.55
TRAPPC9-209ENST00000521167 DENND3A2RUS2 1198 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 TMEM150BA6NC51 233 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 RBAK-RBAKDNI3L0D1 243 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 WNT7AO00755 349 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 ASAP2O43150 1006 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 GAS2O43903 313 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 LPXNO60711 386 aa11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 CD2BP2O95400 341 aaKnown RBP11.63□□□□□ -0.55
TRAPPC9-209ENST00000521167 DARSP14868 501 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms