RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 CCT6AP40227 531 aaKnown RBP18.14■□□□□ 0.49
TNPO1-212ENST00000520850 DEFB103AP81534 67 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 EMC2Q15006 297 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 RTN4RL1Q86UN2 441 aaPredicted RBP18.14■□□□□ 0.49
TNPO1-212ENST00000520850 MCPH1Q8NEM0 835 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 PIGOQ8TEQ8 1089 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 PRPF31Q8WWY3 499 aaKnown RBP18.14■□□□□ 0.49
TNPO1-212ENST00000520850 OSMRQ99650 979 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 NT5C3AQ9H0P0 336 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 ATP6V0A4Q9HBG4 840 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 CHST12Q9NRB3 414 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 INSL6Q9Y581 213 aa18.14■□□□□ 0.49
TNPO1-212ENST00000520850 LOXHD1Q8IVV2 1947 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 ARL2P36404 184 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 PBX2P40425 430 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 FAM189BP81408 668 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 PTPAQ15257 358 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 ATL3Q6DD88 541 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 SRGAP1Q7Z6B7 1085 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 FAM228AQ86W67 206 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 IFNLR1Q8IU57 520 aaPredicted RBP18.13■□□□□ 0.49
TNPO1-212ENST00000520850 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 DEFB123Q8N688 67 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 SNX29Q8TEQ0 813 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 MMTAG2Q9BU76 263 aaKnown RBP18.13■□□□□ 0.49
TNPO1-212ENST00000520850 TRAIPQ9BWF2 469 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 NFKBIZQ9BYH8 718 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 TMX1Q9H3N1 280 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 ZNF576Q9H609 170 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 SLC28A3Q9HAS3 691 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 IFT122Q9HBG6 1241 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 RGS18Q9NS28 235 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 C1orf112Q9NSG2 853 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 MTMR10Q9NXD2 777 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 DNM3Q9UQ16 869 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 GINS2Q9Y248 185 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 COL4A3BPQ9Y5P4 624 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 TTC3P53804 2025 aa18.13■□□□□ 0.49
TNPO1-212ENST00000520850 VWA3AA6NCI4 1184 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 TLL1O43897 1013 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 CYP11B2P19099 503 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 NFX1Q12986 1120 aaKnown RBP18.12■□□□□ 0.49
TNPO1-212ENST00000520850 DSC3Q14574 896 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 ECM1Q16610 540 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 NLRP7Q8WX94 980 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 CCDC43Q96MW1 224 aaKnown RBP18.12■□□□□ 0.49
TNPO1-212ENST00000520850 TTYH1Q9H313 450 aaPredicted RBP18.12■□□□□ 0.49
TNPO1-212ENST00000520850 KIAA1024Q9UPX6 916 aa18.12■□□□□ 0.49
TNPO1-212ENST00000520850 YBX2Q9Y2T7 364 aaKnown RBP18.12■□□□□ 0.49
TNPO1-212ENST00000520850 A0A087WZ62 844 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 EYA4O95677 639 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 ZSCAN22P10073 491 aaPredicted RBP18.11■□□□□ 0.49
TNPO1-212ENST00000520850 RABGGTBP53611 331 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 LAMTOR4Q0VGL1 99 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 BECN1Q14457 450 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 SLC39A14Q15043 492 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 SLC24A5Q71RS6 500 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 MYOCDQ8IZQ8 938 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 SP7Q8TDD2 431 aaPredicted RBP18.11■□□□□ 0.49
TNPO1-212ENST00000520850 TMEM143Q96AN5 459 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 FDXACB1Q9BRP7 624 aaPredicted RBP18.11■□□□□ 0.49
TNPO1-212ENST00000520850 ZBED2Q9BTP6 218 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 ELAC1Q9H777 363 aaKnown RBP18.11■□□□□ 0.49
TNPO1-212ENST00000520850 SRPRBQ9Y5M8 271 aaKnown RBP18.11■□□□□ 0.49
TNPO1-212ENST00000520850 CLIC4Q9Y696 253 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 ARID2Q68CP9 1835 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 PTPRSQ13332 1948 aa18.11■□□□□ 0.49
TNPO1-212ENST00000520850 COL4A6Q14031 1691 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 ARHGEF35A5YM69 484 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 SLC34A2O95436 690 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 STAG3L1P0CL83 205 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 ZSCAN20P17040 1043 aaPredicted RBP18.1■□□□□ 0.49
TNPO1-212ENST00000520850 SFPQP23246 707 aaKnown RBP eCLIP18.1■□□□□ 0.49
TNPO1-212ENST00000520850 NASPP49321 788 aaPredicted RBP18.1■□□□□ 0.49
TNPO1-212ENST00000520850 TFDP1Q14186 410 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 PADI6Q6TGC4 694 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 LINC01599Q8WXQ3 324 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 ZNF396Q96N95 335 aaPredicted RBP18.1■□□□□ 0.49
TNPO1-212ENST00000520850 CCSER1Q9C0I3 900 aa18.1■□□□□ 0.49
TNPO1-212ENST00000520850 DDX19AQ9NUU7 478 aaKnown RBP18.1■□□□□ 0.49
TNPO1-212ENST00000520850 C9IYK1 514 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 CDC25AP30304 524 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 UBA7P41226 1012 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 SARSP49591 514 aaKnown RBP18.09■□□□□ 0.49
TNPO1-212ENST00000520850 PTENP60484 403 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 NPAS4Q8IUM7 802 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 RSPH1Q8WYR4 309 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 ZNF689Q96CS4 500 aaPredicted RBP18.09■□□□□ 0.49
TNPO1-212ENST00000520850 SCLT1Q96NL6 688 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 USP28Q96RU2 1077 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 ADAM2Q99965 735 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 TIPINQ9BVW5 301 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 BHMT2Q9H2M3 363 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 NKX2-4Q9H2Z4 354 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 DACT1Q9NYF0 836 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 KCND2Q9NZV8 630 aa18.09■□□□□ 0.49
TNPO1-212ENST00000520850 KCNG1Q9UIX4 513 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms