RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 PNMA5Q96PV4 448 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 IFIH1Q9BYX4 1025 aaKnown RBP13.19□□□□□ -0.3
HPS4-218ENST00000519774 NT5C3AQ9H0P0 336 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 MTIF3Q9H2K0 278 aaKnown RBP13.19□□□□□ -0.3
HPS4-218ENST00000519774 BHMT2Q9H2M3 363 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 XPNPEP1Q9NQW7 623 aa13.19□□□□□ -0.3
HPS4-218ENST00000519774 CXXC1Q9P0U4 656 aaPredicted RBP13.19□□□□□ -0.3
HPS4-218ENST00000519774 GAS2O43903 313 aaKnown RBP13.18□□□□□ -0.3
HPS4-218ENST00000519774 EYA4O95677 639 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
HPS4-218ENST00000519774 CD52P31358 61 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 TXLNAP40222 546 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 KCNJ6P48051 423 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 GPC3P51654 580 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 NUCB2P80303 420 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 KARSQ15046 597 aaKnown RBP13.18□□□□□ -0.3
HPS4-218ENST00000519774 ATL3Q6DD88 541 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 PADI6Q6TGC4 694 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 TSHZ1Q6ZSZ6 1077 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 USP49Q70CQ1 688 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 PSPC1Q8WXF1 523 aaKnown RBP13.18□□□□□ -0.3
HPS4-218ENST00000519774 HERVK_113Q902F9 699 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 SEPT8Q92599 483 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 SYMPKQ92797 1274 aaKnown RBP13.18□□□□□ -0.3
HPS4-218ENST00000519774 EPSTI1Q96J88 318 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
HPS4-218ENST00000519774 CFAP45Q9UL16 551 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 DNM3Q9UQ16 869 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 ATP6V1DQ9Y5K8 247 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
HPS4-218ENST00000519774 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 GPR32O75388 356 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 PLCG1P19174 1290 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 DDIT3P35638 169 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 ME1P48163 572 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
HPS4-218ENST00000519774 KRT85P78386 507 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 PAK2Q13177 524 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 IKBKEQ14164 716 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 TMEM119Q4V9L6 283 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 PLEKHG4Q58EX7 1191 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 HABP4Q5JVS0 413 aaKnown RBP13.17□□□□□ -0.3
HPS4-218ENST00000519774 HYIQ5T013 277 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 KSR1Q8IVT5 923 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 KCNG4Q8TDN1 519 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 TCP11Q8WWU5 503 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 ADAMTS10Q9H324 1103 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 AGO3Q9H9G7 860 aaKnown RBP13.17□□□□□ -0.3
HPS4-218ENST00000519774 GPRC5CQ9NQ84 441 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
HPS4-218ENST00000519774 SLC4A7Q9Y6M7 1214 aa13.17□□□□□ -0.3
HPS4-218ENST00000519774 MORC2Q9Y6X9 1032 aaPredicted RBP13.17□□□□□ -0.3
HPS4-218ENST00000519774 TCHHQ07283 1943 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 A0A087WZ62 844 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 SLC26A4O43511 780 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 CUTAO60888 179 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 PPP6R2O75170 966 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 RPS6KA5O75582 802 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 LAMTOR4Q0VGL1 99 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
HPS4-218ENST00000519774 FAM102BQ5T8I3 360 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 ZNF410Q86VK4 478 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 USP38Q8NB14 1042 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 MCPH1Q8NEM0 835 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 PRPF31Q8WWY3 499 aaKnown RBP13.16□□□□□ -0.3
HPS4-218ENST00000519774 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 APBB2Q92870 758 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 SPATA32Q96LK8 384 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 FDXACB1Q9BRP7 624 aaPredicted RBP13.16□□□□□ -0.3
HPS4-218ENST00000519774 GCOM2Q9BZD3 368 aaPredicted RBP13.16□□□□□ -0.3
HPS4-218ENST00000519774 CCSER1Q9C0I3 900 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 SQORQ9Y6N5 450 aa13.16□□□□□ -0.3
HPS4-218ENST00000519774 PTPRSQ13332 1948 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 ABHD14A-ACY1A0A1B0GW23 586 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 CSDE1O75534 798 aaKnown RBP13.15□□□□□ -0.3
HPS4-218ENST00000519774 PLA2G4BP0C869 781 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 DARSP14868 501 aaKnown RBP13.15□□□□□ -0.3
HPS4-218ENST00000519774 CYP11B2P19099 503 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 FGFR4P22455 802 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
HPS4-218ENST00000519774 DHX8Q14562 1220 aaKnown RBP13.15□□□□□ -0.3
HPS4-218ENST00000519774 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
HPS4-218ENST00000519774 FAM228AQ86W67 206 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 RNF149Q8NC42 400 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 LRRC15Q8TF66 581 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 POLD4Q9HCU8 107 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 TSHZ2Q9NRE2 1034 aa13.15□□□□□ -0.3
HPS4-218ENST00000519774 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms