RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 GJD3Q8N144 294 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 LRRC71Q8N4P6 559 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 ETNPPLQ8TBG4 499 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 AIFM3Q96NN9 605 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 PPP1R16BQ96T49 567 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 PHF20Q9BVI0 1012 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 NIFKQ9BYG3 293 aaKnown RBP14□□□□□ -0.17
TRAPPC9-206ENST00000519482 ADAMTS10Q9H324 1103 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 ATP6V0A4Q9HBG4 840 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 PCDHB12Q9Y5F1 795 aa14□□□□□ -0.17
TRAPPC9-206ENST00000519482 TBKBP1A7MCY6 615 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 PFKFB2O60825 505 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 PDIA4P13667 645 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 ZSCAN20P17040 1043 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 DNAJB1P25685 340 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 GPC3P51654 580 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 UBE3AQ05086 875 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 CUL4AQ13619 759 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 INF2Q27J81 1249 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 POF1BQ8WVV4 589 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 GJA10Q969M2 543 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 ZSCAN31Q96LW9 406 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 EPHX3Q9H6B9 360 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 CD320Q9NPF0 282 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 PRKAG3Q9UGI9 489 aa13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 DDX25Q9UHL0 483 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-206ENST00000519482 IGKV6-21A0A0C4DH24 114 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 CCDC194A0A1B0GVG4 234 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 PI4K2BG5E9Z4 385 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 HOXA2O43364 376 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 DARSP14868 501 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 GCFC2P16383 781 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 IBSPP21815 317 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 MCM4P33991 863 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 ADAM15Q13444 863 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 SPOUT1Q5T280 376 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 SEPT9Q9UHD8 586 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 TPCN1Q9ULQ1 816 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 KCNJ14Q9UNX9 436 aa13.98□□□□□ -0.17
TRAPPC9-206ENST00000519482 DKC1O60832 514 aaKnown RBP eCLIP13.97□□□□□ -0.176e-7■■■■■ 30.5
TRAPPC9-206ENST00000519482 GPR37L1O60883 481 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 STBD1O95210 358 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 SSTR3P32745 418 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 DNM2P50570 870 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 PSMC5P62195 406 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 LETM2Q2VYF4 491 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 MTERF2Q49AM1 385 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 NEK8Q86SG6 692 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 NLRP7Q8WX94 980 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 WASF1Q92558 559 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 KHSRPQ92945 711 aaKnown RBP eCLIP13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 TMX3Q96JJ7 454 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 FAM20AQ96MK3 541 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 CEP89Q96ST8 783 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 IGFLR1Q9H665 355 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 KCNMB3Q9NPA1 279 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 TYW1Q9NV66 732 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 ARID2Q68CP9 1835 aa13.97□□□□□ -0.17
TRAPPC9-206ENST00000519482 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 DDX11L8A8MPP1 907 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 TBX3O15119 743 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 MBTPS2O43462 519 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 SLC37A4O43826 429 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 MAFO75444 373 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 EOMESO95936 686 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 FGFR1P11362 822 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 LAG3P18627 525 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 GTF2F1P35269 517 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■■ 33.7
TRAPPC9-206ENST00000519482 IRS1P35568 1242 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 AK2P54819 239 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 DLX2Q07687 328 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 PPP2R5CQ13362 524 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 PDE12Q6L8Q7 609 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 EFHBQ8N7U6 833 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 JPH2Q9BR39 696 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 LRFN3Q9BTN0 628 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 GCOM2Q9BZD3 368 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 CWH43Q9H720 699 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 TLR9Q9NR96 1032 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 CHST12Q9NRB3 414 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 DACT1Q9NYF0 836 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 LIMCH1Q9UPQ0 1083 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 LZTS1Q9Y250 596 aa13.96□□□□□ -0.17
TRAPPC9-206ENST00000519482 A0A0U1RQF3 1178 aa13.95□□□□□ -0.18
TRAPPC9-206ENST00000519482 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
TRAPPC9-206ENST00000519482 LINC01565O15544 149 aa13.95□□□□□ -0.18
TRAPPC9-206ENST00000519482 CCNT1O60563 726 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-206ENST00000519482 TBX10O75333 385 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms