RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 BLIDQ8IZY5 108 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 COLGALT1Q8NBJ5 622 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 NLRP7Q8WX94 980 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 CDCA3Q99618 268 aaPredicted RBP12.25□□□□□ -0.45
PVT1-208ENST00000519481 TM6SF1Q9BZW5 370 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 TMEM117Q9H0C3 514 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 TLR9Q9NR96 1032 aa12.25□□□□□ -0.45
PVT1-208ENST00000519481 TYW1Q9NV66 732 aaKnown RBP12.25□□□□□ -0.45
PVT1-208ENST00000519481 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 ZNF862O60290 1169 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 CDKL5O76039 1030 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 FGFR1P11362 822 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 XBP1P17861 261 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 IRS1P35568 1242 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 PPM1AP35813 382 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 KRT17Q04695 432 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 STK3Q13188 491 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 TOB2Q14106 344 aaPredicted RBP12.24□□□□□ -0.45
PVT1-208ENST00000519481 DSC3Q14574 896 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.459e-7■■■■□ 23.6
PVT1-208ENST00000519481 XKR3Q5GH77 459 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 MOXD1Q6UVY6 613 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 KRT25Q7Z3Z0 450 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 ADGRD2Q7Z7M1 963 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 GCOM2Q9BZD3 368 aaPredicted RBP12.24□□□□□ -0.45
PVT1-208ENST00000519481 ADAMTS10Q9H324 1103 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 C11orf16Q9NQ32 467 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 DACT1Q9NYF0 836 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 SEPT9Q9UHD8 586 aaPredicted RBP12.24□□□□□ -0.45
PVT1-208ENST00000519481 LZTS1Q9Y250 596 aa12.24□□□□□ -0.45
PVT1-208ENST00000519481 CYP3A7-CYP3A51PA0A087WV96 503 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 DKC1O60832 514 aaKnown RBP eCLIP12.23□□□□□ -0.452e-8■■■□□ 18.6
PVT1-208ENST00000519481 PSMD10O75832 226 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 EYA4O95677 639 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 NEFLP07196 543 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 DARSP14868 501 aaKnown RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 CYP3A7P24462 503 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 GPC3P51654 580 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 BMS1Q14692 1282 aaKnown RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 UGCGQ16739 394 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 MTERF2Q49AM1 385 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 ECHDC2Q86YB7 292 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 LRRC43Q8N309 656 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 LINC01465Q8N7H1 131 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 DAGLBQ8NCG7 672 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 RNF169Q8NCN4 708 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 ZNF668Q96K58 619 aaPredicted RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 MSLNLQ96KJ4 702 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 ZNF558Q96NG5 402 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 JPH2Q9BR39 696 aaPredicted RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 INO80BQ9C086 356 aaPredicted RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 PDRG1Q9NUG6 133 aa12.23□□□□□ -0.45
PVT1-208ENST00000519481 DDX25Q9UHL0 483 aaKnown RBP12.23□□□□□ -0.45
PVT1-208ENST00000519481 CCDC194A0A1B0GVG4 234 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 MARCH6O60337 910 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 TDP2O95551 362 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 EOMESO95936 686 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 PLCB3Q01970 1234 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 COASYQ13057 564 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 SMRP1Q8NCR6 262 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 RSPH1Q8WYR4 309 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 MRPS27Q92552 414 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 CASD1Q96PB1 797 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 NAP1L4Q99733 375 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 LARP6Q9BRS8 491 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 MRPL9Q9BYD2 267 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 NIFKQ9BYG3 293 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 CWH43Q9H720 699 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 NGRNQ9NPE2 291 aaKnown RBP12.22□□□□□ -0.45
PVT1-208ENST00000519481 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
PVT1-208ENST00000519481 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.45
PVT1-208ENST00000519481 KIAA1671Q9BY89 1806 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 A0A0U1RQF3 1178 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 PER2O15055 1255 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 EDIL3O43854 480 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 SKIP12755 728 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 SFPQP23246 707 aaKnown RBP eCLIP12.21□□□□□ -0.453e-6■■□□□ 12.3
PVT1-208ENST00000519481 ERVFC1P60507 584 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 PSMC5P62195 406 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 TARBP2Q15633 366 aaKnown RBP12.21□□□□□ -0.45
PVT1-208ENST00000519481 DUSP6Q16828 381 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 LETM2Q2VYF4 491 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 PLPP4Q5VZY2 271 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 TMC7Q7Z402 723 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 ZNF410Q86VK4 478 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 RNF135Q8IUD6 432 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 EXOC8Q8IYI6 725 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 GJA10Q969M2 543 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 FAM20AQ96MK3 541 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 TCF25Q9BQ70 676 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 SPG21Q9NZD8 308 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 CLEC1BQ9P126 229 aa12.21□□□□□ -0.45
PVT1-208ENST00000519481 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms