RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 CD302Q8IX05 232 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 NIM1KQ8IY84 436 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 ZNF473Q8WTR7 871 aaKnown RBP11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 ARL8AQ96BM9 186 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 BORCS6Q96GS4 357 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 GANQ9H2C0 597 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 SLC24A3Q9HC58 644 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 SALL4Q9UJQ4 1053 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 PCDHAC2Q9Y5I4 1007 aa11.01□□□□□ -0.65
SH2D4A-204ENST00000519207 FAM86B1E9PN63 330 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 CALUO43852 315 aaPredicted RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 FAM86B2P0C5J1 330 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 VEGFBP49765 207 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 CACNB1Q02641 598 aaPredicted RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 C2orf54Q08AI8 447 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 NNTQ13423 1086 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 PTGISQ16647 500 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 GLE1Q53GS7 698 aaKnown RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 LACTB2Q53H82 288 aaPredicted RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 C10orf76Q5T2E6 689 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 KLHDC7AQ5VTJ3 777 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 FAM210AQ96ND0 272 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 VPS33BQ9H267 617 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 EBF2Q9HAK2 575 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 HOMER3Q9NSC5 361 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 VAV3Q9UKW4 847 aa11□□□□□ -0.65
SH2D4A-204ENST00000519207 TPX2Q9ULW0 747 aaKnown RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 BZW2Q9Y6E2 419 aaKnown RBP11□□□□□ -0.65
SH2D4A-204ENST00000519207 BTNL10A8MVZ5 291 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 MSH4O15457 936 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 EYA4O95677 639 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 FAM107AO95990 144 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 EZRP15311 586 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 RPL13P26373 211 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 CLNS1AP54105 237 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 RWDD2BP57060 319 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 PSMC6P62333 389 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 CXCL9Q07325 125 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 IFFO1Q0D2I5 559 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 KLHL30Q0D2K2 578 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 IKQ13123 557 aaPredicted RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 PABPC4Q13310 644 aaKnown RBP eCLIP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 PDCLQ13371 301 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ASIC2Q16515 512 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 CCDC181Q5TID7 509 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 EMBQ6PCB8 327 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 SFR1Q86XK3 245 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 MYCBPAPQ8TBZ2 947 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 REEP2Q9BRK0 252 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ZHX3Q9H4I2 956 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 METTL14Q9HCE5 456 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ARMCX3Q9UH62 379 aaPredicted RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 HDAC9Q9UKV0 1011 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ATP8B3O60423 1300 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 OPLAHO14841 1288 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 SLC16A3O15427 465 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 PPP1R37O75864 691 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 GDF11O95390 407 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 AFPP02771 609 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 GAP43P17677 238 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ANXA13P27216 316 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 CASP5P51878 434 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 RAPGEF1Q13905 1077 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 USH1GQ495M9 461 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 CFAP221Q4G0U5 840 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 DPY19L2P1Q6NXN4 242 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 FAM43BQ6ZT52 329 aaPredicted RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 IQCKQ8N0W5 287 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 SUPT20HQ8NEM7 779 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 TBC1D5Q92609 795 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 UIMC1Q96RL1 719 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 TYW1Q9NV66 732 aaKnown RBP10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 FBXL5Q9UKA1 691 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 ZNRF3Q9ULT6 936 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 PCDHGC5Q9Y5F6 944 aa10.99□□□□□ -0.65
SH2D4A-204ENST00000519207 EME2A4GXA9 379 aaPredicted RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 MEIS1O00470 390 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 CAPN15O75808 1086 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 GH2P01242 217 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 XRCC5P13010 732 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 HOXD13P35453 343 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 SSR1P43307 286 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 APBA1Q02410 837 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 MKRN4PQ13434 485 aaPredicted RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 SLC5A9Q2M3M2 681 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 DEFB115Q30KQ5 88 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 ZC3H12AQ5D1E8 599 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 ANKRD13CQ8N6S4 541 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 CCT8L2Q96SF2 557 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 EIF2AK1Q9BQI3 630 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 LRRC1Q9BTT6 524 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 TUFT1Q9NNX1 390 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 OLFML3Q9NRN5 406 aa10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 SPATS2LQ9NUQ6 558 aaKnown RBP10.98□□□□□ -0.65
SH2D4A-204ENST00000519207 HERC5Q9UII4 1024 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms