RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 EMC2Q15006 297 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 CTU1Q7Z7A3 348 aaKnown RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 TRIM50Q86XT4 487 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 USP6NLQ92738 828 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ZKSCAN5Q9Y2L8 839 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PPME1Q9Y570 386 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ZMYM2Q9UBW7 1377 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 CETN3O15182 167 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 TEX33O43247 280 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PPP1R37O75864 691 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 NR2F2P24468 414 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 RFC5P40937 340 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 SMTNP53814 917 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PEX3P56589 373 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 RTP1P59025 263 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 IRF5Q13568 498 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 CCDC40Q4G0X9 1142 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 GJC2Q5T442 439 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 IQSEC1Q6DN90 963 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 HS2ST1Q7LGA3 356 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-209ENST00000519141 STRA6Q9BX79 667 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ST6GALNAC4Q9H4F1 302 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 XPNPEP1Q9NQW7 623 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
SPIDR-209ENST00000519141 ZSWIM8A7E2V4 1837 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 FKTNO75072 461 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 NR3C1P04150 777 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 CYP2B6P20813 491 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 MSNP26038 577 aaKnown RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 RPL13P26373 211 aaKnown RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 MARK3P27448 753 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 FCGRTP55899 365 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 UBXN1Q04323 297 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 KCNA1Q09470 495 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 ADAM9Q13443 819 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 PTPN21Q16825 1174 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 DUSP28Q4G0W2 176 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 OLFML2BQ68BL8 750 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 HAUS6Q7Z4H7 955 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 SYCP3Q8IZU3 236 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 GOLGA5Q8TBA6 731 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 SPIRE2Q8WWL2 714 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 IFT74Q96LB3 600 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 ZNF830Q96NB3 372 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 ACCSQ96QU6 501 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 NOC4LQ9BVI4 516 aaKnown RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 GBP3Q9H0R5 595 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 POLR3FQ9H1D9 316 aaPredicted RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 DHX33Q9H6R0 707 aaKnown RBP13.62□□□□□ -0.23
SPIDR-209ENST00000519141 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
SPIDR-209ENST00000519141 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.61□□□□□ -0.23
SPIDR-209ENST00000519141 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 ESPNB1AK53 854 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 SLC16A4O15374 487 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 SMPD1P17405 629 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
SPIDR-209ENST00000519141 PBX1P40424 430 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 NPTX2P47972 431 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 SOX10P56693 466 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 PLCB4Q15147 1175 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 TARBP2Q15633 366 aaKnown RBP13.61□□□□□ -0.23
SPIDR-209ENST00000519141 MAN2A1Q16706 1144 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 KSR1Q8IVT5 923 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 OR6J1Q8NGC5 347 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 AFG1LQ8WV93 481 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 HVCN1Q96D96 273 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 FLRT1Q9NZU1 646 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 KCNG1Q9UIX4 513 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
SPIDR-209ENST00000519141 H0YCG3 227 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 TGFB1I1O43294 461 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 LGALS2P05162 132 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 DNM2P50570 870 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 GTF2BQ00403 316 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 TNFAIP2Q03169 654 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 CCL14Q16627 93 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 NFIL3Q16649 462 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 FKBP15Q5T1M5 1219 aa13.6□□□□□ -0.23
SPIDR-209ENST00000519141 LRRC8AQ8IWT6 810 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms