RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 GIT1Q9Y2X7 761 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 COQ6Q9Y2Z9 468 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 TIMM13Q9Y5L4 95 aaPredicted RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 FAM208AQ9UK61 1670 aaKnown RBP5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 NFAT5O94916 1531 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 UNC79Q9P2D8 2635 aa5.94□□□□□ -1.46
HMGB1P23-201ENST00000518743 PTPDC1A2A3K4 754 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZNF891A8MT65 544 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 H7BY64 318 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 FGF10O15520 208 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NPHS1O60500 1241 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 LEFTY1O75610 366 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PRKD3O94806 890 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SYPP08247 313 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 DNM2P50570 870 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MECP2P51608 486 aaKnown RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 LACTBP83111 547 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPIRE1Q08AE8 756 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MINDY4Q4G0A6 757 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMEM240Q5SV17 173 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 GPR158Q5T848 1215 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PPP4R4Q6NUP7 873 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 FAM214BQ7L5A3 538 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 OTOP1Q7RTM1 612 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 HDGFL2Q7Z4V5 671 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 AMOTL1Q8IY63 956 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ZZZ3Q8IYH5 903 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ARMC10Q8N2F6 343 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NXPE1Q8N323 547 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 JPH3Q8WXH2 748 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SSH1Q8WYL5 1049 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PIGBQ92521 554 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PMM1Q92871 262 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC5A5Q92911 643 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PTCHD1Q96NR3 888 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 RPS6KC1Q96S38 1066 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 NUP88Q99567 741 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 MCMBPQ9BTE3 642 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC8Q9H0W5 538 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 ARNT2Q9HBZ2 717 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 CATSPERZQ9NTU4 200 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDHA2Q9Y5H9 948 aa5.93□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLC12A8A0AV02 714 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 SHISA3A0PJX4 238 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 WDR64B1ANS9 1081 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ERC2O15083 957 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 HIP1RO75146 1068 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 LSP1P33241 339 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CYP2C19P33261 490 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ID4P47928 161 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PHC1P78364 1004 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 GTF2H3Q13889 308 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 OVCH1Q7RTY7 1134 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 DGKHQ86XP1 1220 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CCDC103Q8IW40 242 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 RCBTB1Q8NDN9 531 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 COG1Q8WTW3 980 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 FUBP3Q96I24 572 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 CHAMP1Q96JM3 812 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 DUSP15Q9H1R2 295 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 GBA2Q9HCG7 927 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 RCAN3Q9UKA8 241 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 LUC7L2Q9Y383 392 aaKnown RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDH11XQ9BZA7 1347 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 PCDH11YQ9BZA8 1340 aa5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 USP42Q9H9J4 1324 aaKnown RBP5.92□□□□□ -1.46
HMGB1P23-201ENST00000518743 ATRXP46100 2492 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SLX4Q8IY92 1834 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 WTIPA6NIX2 430 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 NPHP1O15259 732 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 GSC2O15499 205 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAFKO60675 156 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RPS6KA4O75676 772 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MYBL2P10244 700 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ATP2A2P16615 1042 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ERVK-21P61565 698 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 PURAQ00577 322 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 LRRC41Q15345 812 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 MAP9Q49MG5 647 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 CHTF18Q8WVB6 975 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RAPGEF4Q8WZA2 1011 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 HEXIM2Q96MH2 286 aaKnown RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 GUCD1Q96NT3 240 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 CDADC1Q9BWV3 514 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TRIM8Q9BZR9 551 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 IPPKQ9H8X2 491 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMOD3Q9NYL9 352 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 STOML1Q9UBI4 398 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 DUSP13Q9UII6 198 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TMEFF2Q9UIK5 374 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ASAP1Q9ULH1 1129 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 COA3Q9Y2R0 106 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SPO11Q9Y5K1 396 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 SNX11Q9Y5W9 270 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ADGRB1O14514 1584 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 TNKSO95271 1327 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 ROCK1Q13464 1354 aa5.91□□□□□ -1.46
HMGB1P23-201ENST00000518743 RGPD2P0DJD1 1756 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms