RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MRFAP1Q9Y605 127 aa6.04□□□□□ -1.44
SQLE-202ENST00000518604 TNKSO95271 1327 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 E2F8A0AVK6 867 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 NPIPB6E9PJ23 425 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 FFAR3O14843 346 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 NRP2O60462 931 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 OPHN1O60890 802 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 KLHL18O94889 574 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 MYBL2P10244 700 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.03□□□□□ -1.44
SQLE-202ENST00000518604 CT83Q5H943 113 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 PITRM1Q5JRX3 1037 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 FAM26FQ5R3K3 315 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 CCDC62Q6P9F0 684 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 UNQ6494/PRO21346Q6UXR6 183 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 OTOP2Q7RTS6 562 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 REXO1L1PQ8IX06 675 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 CMIPQ8IY22 773 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 IFNL2Q8IZJ0 200 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 CDYL2Q8N8U2 506 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 LINC01356Q8N9X3 169 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 ZNF526Q8TF50 670 aaPredicted RBP6.03□□□□□ -1.44
SQLE-202ENST00000518604 ZCCHC14Q8WYQ9 949 aaKnown RBP6.03□□□□□ -1.44
SQLE-202ENST00000518604 EAF2Q96CJ1 260 aaPredicted RBP6.03□□□□□ -1.44
SQLE-202ENST00000518604 HIST1H2AHQ96KK5 128 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 YTHDC1Q96MU7 727 aaKnown RBP6.03□□□□□ -1.44
SQLE-202ENST00000518604 HIST1H2AJQ99878 128 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 MKS1Q9NXB0 559 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 SAE1Q9UBE0 346 aaPredicted RBP6.03□□□□□ -1.44
SQLE-202ENST00000518604 PCDHB6Q9Y5E3 794 aa6.03□□□□□ -1.44
SQLE-202ENST00000518604 ARID1BQ8NFD5 2236 aaPredicted RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 DDX3XO00571 662 aaKnown RBP eCLIP6.02□□□□□ -1.45
SQLE-202ENST00000518604 CLEC2LP0C7M8 214 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 CCND1P24385 295 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 IARSP41252 1262 aaKnown RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 ETV4P43268 484 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 SESN2P58004 480 aaPredicted RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 TOP3AQ13472 1001 aaPredicted RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 MAN2A1Q16706 1144 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 PTPN21Q16825 1174 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 ANO4Q32M45 955 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 TCERG1LQ5VWI1 586 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 CIAPIN1Q6FI81 312 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 ZBTB46Q86UZ6 589 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 LYSMD2Q8IV50 215 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 SLC41A1Q8IVJ1 513 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 CARFQ8N187 725 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 OR5AN1Q8NGI8 311 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 OR14C36Q8NHC7 312 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 AJUBAQ96IF1 538 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 PAWRQ96IZ0 340 aaKnown RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 CAMKK2Q96RR4 588 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 SMAD5Q99717 465 aaKnown RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 NOL10Q9BSC4 688 aaKnown RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 OSBPL6Q9BZF3 934 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 KATNBL1Q9H079 304 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 TMEM168Q9H0V1 697 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 CCM2LQ9NUG4 571 aaPredicted RBP6.02□□□□□ -1.45
SQLE-202ENST00000518604 DNAJC28Q9NX36 388 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 PRSS50Q9UI38 385 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 VWA7Q9Y334 891 aa6.02□□□□□ -1.45
SQLE-202ENST00000518604 KLHL33A6NCF5 533 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 FZD9O00144 591 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 NUAK1O60285 661 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 PCDH8O95206 1070 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 XPAP23025 273 aaPredicted RBP6.01□□□□□ -1.45
SQLE-202ENST00000518604 MTNR1BP49286 362 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 SLC5A3P53794 718 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 MCL1Q07820 350 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 SPIDRQ14159 915 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 ABCB5Q2M3G0 1257 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 Q6ZUG5 572 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 KCNK18Q7Z418 384 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 KLHL36Q8N4N3 616 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 TGFBRAP1Q8WUH2 860 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 GAB3Q8WWW8 586 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 AUTS2Q8WXX7 1259 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 TOX2Q96NM4 488 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 KCTD10Q9H3F6 313 aa6.01□□□□□ -1.45
SQLE-202ENST00000518604 BARX1Q9HBU1 254 aaPredicted RBP6.01□□□□□ -1.45
SQLE-202ENST00000518604 ZNF277Q9NRM2 450 aaPredicted RBP6.01□□□□□ -1.45
SQLE-202ENST00000518604 H2AFYO75367 372 aaKnown RBP6□□□□□ -1.45
SQLE-202ENST00000518604 SNUPNO95149 360 aaKnown RBP6□□□□□ -1.45
SQLE-202ENST00000518604 MT-CO1P00395 513 aa6□□□□□ -1.45
SQLE-202ENST00000518604 CYP1A1P04798 512 aaPredicted RBP6□□□□□ -1.45
SQLE-202ENST00000518604 C8AP07357 584 aa6□□□□□ -1.45
SQLE-202ENST00000518604 RECQLP46063 649 aaPredicted RBP6□□□□□ -1.45
SQLE-202ENST00000518604 NRG3P56975 720 aa6□□□□□ -1.45
SQLE-202ENST00000518604 MUM1Q2TAK8 710 aa6□□□□□ -1.45
SQLE-202ENST00000518604 TRIM68Q6AZZ1 485 aa6□□□□□ -1.45
SQLE-202ENST00000518604 BCL6BQ8N143 479 aaPredicted RBP6□□□□□ -1.45
SQLE-202ENST00000518604 TXNDC5Q8NBS9 432 aaKnown RBP6□□□□□ -1.45
SQLE-202ENST00000518604 NUDT10Q8NFP7 164 aa6□□□□□ -1.45
SQLE-202ENST00000518604 PPP1R14CQ8TAE6 165 aa6□□□□□ -1.45
SQLE-202ENST00000518604 ADAMTS17Q8TE56 1095 aa6□□□□□ -1.45
SQLE-202ENST00000518604 JDP2Q8WYK2 163 aa6□□□□□ -1.45
SQLE-202ENST00000518604 GFM2Q969S9 779 aaKnown RBP6□□□□□ -1.45
SQLE-202ENST00000518604 NUDT11Q96G61 164 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms