RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 MYL5Q02045 173 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 MARCH8Q5T0T0 291 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 ADAMTS4O75173 837 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 PLS3P13797 630 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 KLRC1P26715 233 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 NPTX2P47972 431 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 MRE11P49959 708 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 PURAQ00577 322 aaKnown RBP17.13■□□□□ 0.33
TRPS1-206ENST00000517323 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
TRPS1-206ENST00000517323 KCND2Q9NZV8 630 aa17.13■□□□□ 0.33
TRPS1-206ENST00000517323 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 C22orf31O95567 290 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 F2P00734 622 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 GLRA2P23416 452 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 CPT1AP50416 773 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 LBX1P52954 281 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 TMEM62Q0P6H9 643 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 PPFIA1Q13136 1202 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 MFSD10Q14728 455 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 EPM2AIP1Q7L775 607 aaPredicted RBP17.12■□□□□ 0.33
TRPS1-206ENST00000517323 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 PXYLP1Q8TE99 480 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 BPIFA3Q9BQP9 254 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 UNC93B1Q9H1C4 597 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 FRMPD3Q5JV73 1810 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 ZMYM2Q9UBW7 1377 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 MAFO75444 373 aaPredicted RBP17.12■□□□□ 0.33
TRPS1-206ENST00000517323 SMIM10L2AP0DMW4 78 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 SMIM10L2BP0DMW5 78 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 GJA9P57773 515 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 GRIK4Q16099 956 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 EFCAB12Q6NXP0 572 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 TTI2Q6NXR4 508 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 PRPF31Q8WWY3 499 aaKnown RBP17.12■□□□□ 0.33
TRPS1-206ENST00000517323 P2RX5Q93086 422 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 FAM167AQ96KS9 214 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 DRC1Q96MC2 740 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 ZNF215Q9UL58 517 aaPredicted RBP17.12■□□□□ 0.33
TRPS1-206ENST00000517323 PTPN22Q9Y2R2 807 aa17.12■□□□□ 0.33
TRPS1-206ENST00000517323 PSMA7O14818 248 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 HBP1O60381 514 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 VTNP04004 478 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 EDN1P05305 212 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 PSMD2Q13200 908 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 KCNA10Q16322 511 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 OLFML3Q9NRN5 406 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 DDX20Q9UHI6 824 aaKnown RBP17.11■□□□□ 0.33
TRPS1-206ENST00000517323 DACH1Q9UI36 760 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 LRRIQ4A6NIV6 560 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 CLIC2O15247 247 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 GNRH1P01148 92 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 ASGR1P07306 291 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 PSEN2P49810 448 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 HAUS6Q7Z4H7 955 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
TRPS1-206ENST00000517323 SLAIN1Q8ND83 568 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 ZSWIM2Q8NEG5 633 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
TRPS1-206ENST00000517323 SRRTQ9BXP5 876 aaKnown RBP17.11■□□□□ 0.33
TRPS1-206ENST00000517323 KCTD10Q9H3F6 313 aa17.11■□□□□ 0.33
TRPS1-206ENST00000517323 LARSQ9P2J5 1176 aaKnown RBP17.11■□□□□ 0.33
TRPS1-206ENST00000517323 TTLL13PA6NNM8 815 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 HSPA8P11142 646 aaKnown RBP17.1■□□□□ 0.33
TRPS1-206ENST00000517323 GAP43P17677 238 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
TRPS1-206ENST00000517323 ARL2P36404 184 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 SLC26A2P50443 739 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 CAPSQ13938 189 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 LHX8Q68G74 356 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 IRF2BP1Q8IU81 584 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 MCPH1Q8NEM0 835 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 FAM49AQ9H0Q0 323 aaPredicted RBP17.1■□□□□ 0.33
TRPS1-206ENST00000517323 KMT5AQ9NQR1 393 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 HDAC6Q9UBN7 1215 aa17.1■□□□□ 0.33
TRPS1-206ENST00000517323 SCN10AQ9Y5Y9 1956 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 CCNE1P24864 410 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
TRPS1-206ENST00000517323 STIM1Q13586 685 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 CENPPQ6IPU0 288 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 TMEM161BQ8NDZ6 487 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 HMX1Q9NP08 348 aaPredicted RBP17.09■□□□□ 0.33
TRPS1-206ENST00000517323 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 DENND3A2RUS2 1198 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 IKBKBO14920 756 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 TREHO43280 583 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 TGFB1I1O43294 461 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 PPP1R37O75864 691 aa17.09■□□□□ 0.33
TRPS1-206ENST00000517323 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
TRPS1-206ENST00000517323 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms