RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 MCUQ8NE86 351 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PLBD2Q8NHP8 589 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 SH3RF3Q8TEJ3 882 aaPredicted RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 KCNE4Q8WWG9 221 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MRPS27Q92552 414 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MPHOSPH8Q99549 860 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 FEZ1Q99689 392 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 NRSN2Q9GZP1 204 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 RUBCNLQ9H714 662 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 RBM12Q9NTZ6 932 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 GAR1Q9NY12 217 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PUF60Q9UHX1 559 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PCOLCE2Q9UKZ9 415 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 LZTS1Q9Y250 596 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 GOLGA4Q13439 2230 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SDK2Q58EX2 2172 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 GRID2O43424 1007 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 EXTL3O43909 919 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 HSPA5P11021 654 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SNRPBP14678 240 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 EIF2S2P20042 333 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 CPT1AP50416 773 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 HDAC4P56524 1084 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 MYO1EQ12965 1108 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 PTK7Q13308 1070 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SLC14A1Q13336 389 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 DCTN1Q14203 1278 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SMC1AQ14683 1233 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 TMEM132BQ14DG7 1078 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 WTAPQ15007 396 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 BHLHB9Q6PI77 547 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SLC23A3Q6PIS1 610 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 DHRS13Q6UX07 377 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 CDH24Q86UP0 819 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 REXO1Q8N1G1 1221 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 FAM3CQ92520 227 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 APBB2Q92870 758 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 GLG1Q92896 1179 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 DDX11Q96FC9 970 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 DNAJC2Q99543 621 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 ADAMTS10Q9H324 1103 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 PRDM16Q9HAZ2 1276 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 FBXO28Q9NVF7 368 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 DNAAF2Q9NVR5 837 aaKnown RBP3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 WDR70Q9NW82 654 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 ANAPC2Q9UJX6 822 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 SUGT1Q9Y2Z0 365 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 LRRK1Q38SD2 2015 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 EML5Q05BV3 1969 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 LAMA4Q16363 1823 aa3.98□□□□□ -1.77
SCARNA13-201ENST00000516672 MCM3APO60318 1980 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 DNAJC25-GNG10A0A024R161 153 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 FAM221AA4D161 298 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CFIP05156 583 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 NEFMP07197 916 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 JUPP14923 745 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 NR1D1P20393 614 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 IBSPP21815 317 aaPredicted RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 DHPSP49366 369 aaPredicted RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 GATMP50440 423 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 USP14P54578 494 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CLDN6P56747 220 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 PTH1RQ03431 593 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 KARSQ15046 597 aaKnown RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 NFE2L2Q16236 605 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CCDC157Q569K6 752 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CCDC81Q6ZN84 652 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 GDF7Q7Z4P5 450 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 TMPRSS12Q86WS5 348 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 RIOX2Q8IUF8 465 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 FAM114A1Q8IWE2 563 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 DHX40Q8IX18 779 aaKnown RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 ARL14EPQ8N8R7 260 aaPredicted RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 SPRYD3Q8NCJ5 442 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 SLC22A17Q8WUG5 538 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 RTF1Q92541 710 aaKnown RBP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 FGD4Q96M96 766 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 KXD1Q9BQD3 176 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CLSTN3Q9BQT9 956 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 PLA2G2FQ9BZM2 168 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 CASS4Q9NQ75 786 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 TMEM74BQ9NUR3 256 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 ZBTB21Q9ULJ3 1066 aa3.97□□□□□ -1.77
SCARNA13-201ENST00000516672 MYH7BA7E2Y1 1941 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 MTCL1Q9Y4B5 1905 aaKnown RBP3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 VPS4BO75351 444 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 KRT7P08729 469 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 KLK2P20151 261 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 HNF1BP35680 557 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 THPOP40225 353 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 RHBDL3P58872 404 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 PLCB3Q01970 1234 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 GFPT1Q06210 699 aaPredicted RBP3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 G3BP1Q13283 466 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 LRRC32Q14392 662 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 IQSEC1Q6DN90 963 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 SESTD1Q86VW0 696 aa3.96□□□□□ -1.78
SCARNA13-201ENST00000516672 COLGALT1Q8NBJ5 622 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 448 ms