RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 CYP2J2P51589 502 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 PEX3P56589 373 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 GTF2BQ00403 316 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 PRKCEQ02156 737 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 APBA1Q02410 837 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 MYBPC2Q14324 1141 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 HAUS6Q7Z4H7 955 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 EIF3CQ99613 913 aaKnown RBP16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 GANQ9H2C0 597 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 ARHGAP20Q9P2F6 1191 aa16.93■□□□□ 0.3
THUMPD3-210ENST00000515662 IGSF9BQ9UPX0 1349 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 ATG7O95352 703 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 PLEKP08567 350 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 POLR2FP61218 127 aaKnown RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 KRT83P78385 493 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 TCERG1LQ5VWI1 586 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 MAP1SQ66K74 1059 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 DPY19L2P1Q6NXN4 242 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 NUCKS1Q9H1E3 243 aaKnown RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 NLRC4Q9NPP4 1024 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 FRMD4BQ9Y2L6 1034 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 SYNGAP1Q96PV0 1343 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 SLC16A4O15374 487 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 UBA1P22314 1058 aaKnown RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 NCBP1Q09161 790 aaKnown RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 PDCL2Q8N4E4 241 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 SLC17A8Q8NDX2 589 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 TMEM174Q8WUU8 243 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 PLCB1Q9NQ66 1216 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 PDLIM7Q9NR12 457 aa16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 SEPT9Q9UHD8 586 aaPredicted RBP16.92■□□□□ 0.3
THUMPD3-210ENST00000515662 LRRC37A2A6NM11 1700 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 UNCXA6NJT0 531 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 PGK2P07205 417 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 KIFAP3Q92845 792 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 FGD4Q96M96 766 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 CYP26B1Q9NR63 512 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF215Q9UL58 517 aaPredicted RBP16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 URI1O94763 535 aaPredicted RBP16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 SLU7O95391 586 aaKnown RBP16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 SLC9A1P19634 815 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 PON1P27169 355 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 EXOC3L4Q17RC7 722 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 XKR3Q5GH77 459 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 ANKRD7Q92527 254 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 PKNOX2Q96KN3 472 aa16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 MAFBQ9Y5Q3 323 aaPredicted RBP16.91■□□□□ 0.3
THUMPD3-210ENST00000515662 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 GTPBP10A4D1E9 387 aaKnown RBP16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 SOCS7O14512 581 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 EXOC3O60645 756 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 DGAT1O75907 488 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 ACTN1P12814 892 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 NPTX2P47972 431 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF569Q5MCW4 686 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF662Q6ZS27 426 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 C12orf56Q8IXR9 622 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 MMP19Q99542 508 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 MROH8Q9H579 483 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 C17orf75Q9HAS0 396 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 ZNF302Q9NR11 478 aa16.9■□□□□ 0.3
THUMPD3-210ENST00000515662 IGKV6D-21A0A0A0MT36 114 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 TISP43B9A030 160 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 IPO7O95373 1038 aaKnown RBP16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 ATP4AP20648 1035 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 SMTNP53814 917 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 SOX10P56693 466 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 DMP1Q13316 513 aaPredicted RBP16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 KCTD2Q14681 263 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 PPP2R5AQ15172 486 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 SFMBT2Q5VUG0 894 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 HGSNATQ68CP4 663 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 GBP6Q6ZN66 633 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 TMEM161BQ8NDZ6 487 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 SPIRE2Q8WWL2 714 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 BSNDQ8WZ55 320 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 NTPCRQ9BSD7 190 aaKnown RBP16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 HAUS4Q9H6D7 363 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 MYO1AQ9UBC5 1043 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 TRIM10Q9UDY6 481 aa16.89■□□□□ 0.3
THUMPD3-210ENST00000515662 CCDC169A6NNP5 214 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 ZNF263O14978 683 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 TLR2O60603 784 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 TGFB3P10600 412 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 SNRPFP62306 86 aaKnown RBP16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 CYP27A1Q02318 531 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 KLHDC7AQ5VTJ3 777 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 KIAA1328Q86T90 577 aa16.89■□□□□ 0.29
THUMPD3-210ENST00000515662 GPIHBP1Q8IV16 184 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms