RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 SETQ01105 290 aaPredicted RBP17.85■□□□□ 0.45
LMNA-223ENST00000515459 ITIH3Q06033 890 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 MTMR3Q13615 1198 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 SMC1AQ14683 1233 aaKnown RBP17.85■□□□□ 0.45
LMNA-223ENST00000515459 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 EFCAB12Q6NXP0 572 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 ECHDC2Q86YB7 292 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 UBALD2Q8IYN6 164 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 ZNF710Q8N1W2 664 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 NECTIN4Q96NY8 510 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 PCDHA10Q9Y5I2 948 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 HCFC2Q9Y5Z7 792 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 C2orf71A6NGG8 1288 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 H0Y858 1186 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 EIF4BP23588 611 aaKnown RBP17.84■□□□□ 0.45
LMNA-223ENST00000515459 TMOD1P28289 359 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 MRPL43Q8N983 215 aaKnown RBP17.84■□□□□ 0.45
LMNA-223ENST00000515459 RNF169Q8NCN4 708 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 FAM167AQ96KS9 214 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 ADAM7Q9H2U9 754 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 ADAMTS10Q9H324 1103 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 GABBR1Q9UBS5 961 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 CDH22Q9UJ99 828 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 SAMM50Q9Y512 469 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 MYO10Q9HD67 2058 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
LMNA-223ENST00000515459 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 GOLGA8BA8MQT2 603 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 C2CD4DB7Z1M9 353 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 GALR2O43603 387 aaPredicted RBP17.83■□□□□ 0.44
LMNA-223ENST00000515459 EXOSC10Q01780 885 aaKnown RBP17.83■□□□□ 0.44
LMNA-223ENST00000515459 BMS1Q14692 1282 aaKnown RBP17.83■□□□□ 0.44
LMNA-223ENST00000515459 CLLU1OSQ5K130 101 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 MCTP2Q6DN12 878 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 SLC39A11Q8N1S5 342 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 LINC01465Q8N7H1 131 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 TCEANC2Q96MN5 208 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 POMKQ9H5K3 350 aa17.83■□□□□ 0.44
LMNA-223ENST00000515459 CACNA1HO95180 2353 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 A0A0U1RQF3 1178 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 CLASP2O75122 1294 aaKnown RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 BRD1O95696 1058 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 EOMESO95936 686 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 CDC27P30260 824 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 CA8P35219 290 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 MTHFRP42898 656 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 PFKFB3Q16875 520 aaPredicted RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 LRRC71Q8N4P6 559 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 HELQQ8TDG4 1101 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 MRPL9Q9BYD2 267 aaKnown RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 ZMYND12Q9H0C1 365 aa17.82■□□□□ 0.44
LMNA-223ENST00000515459 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
LMNA-223ENST00000515459 KLF18A0A0U1RQI7 1052 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 ESYT2A0FGR8 921 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 PROB1E7EW31 1015 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 GPC3P51654 580 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 RCAN1P53805 252 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 PRR16Q569H4 304 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 ZNF668Q96K58 619 aaPredicted RBP17.81■□□□□ 0.44
LMNA-223ENST00000515459 SCLT1Q96NL6 688 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 C6orf50Q9HD87 102 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 NRBP2Q9NSY0 501 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 DACT1Q9NYF0 836 aa17.81■□□□□ 0.44
LMNA-223ENST00000515459 WDR64B1ANS9 1081 aa17.8■□□□□ 0.44
LMNA-223ENST00000515459 CXCL14O95715 111 aa17.8■□□□□ 0.44
LMNA-223ENST00000515459 DARSP14868 501 aaKnown RBP17.8■□□□□ 0.44
LMNA-223ENST00000515459 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
LMNA-223ENST00000515459 BCAR1P56945 870 aa17.8■□□□□ 0.44
LMNA-223ENST00000515459 ZNF598Q86UK7 904 aaKnown RBP17.8■□□□□ 0.44
LMNA-223ENST00000515459 CCDC12Q8WUD4 166 aaPredicted RBP17.8■□□□□ 0.44
LMNA-223ENST00000515459 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
LMNA-223ENST00000515459 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
LMNA-223ENST00000515459 ZFHX2Q9C0A1 2572 aaPredicted RBP17.8■□□□□ 0.44
LMNA-223ENST00000515459 NT5C1B-RDH14C9J2C7 533 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 ZNF862O60290 1169 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 OATP04181 439 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 GNA11P29992 359 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 PRKCEQ02156 737 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 ATAT1Q5SQI0 421 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
LMNA-223ENST00000515459 TMEM105Q8N8V8 129 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 TDRD5Q8NAT2 981 aaKnown RBP17.79■□□□□ 0.44
LMNA-223ENST00000515459 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 NLRP7Q8WX94 980 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 DISC1Q9NRI5 854 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 DZANK1Q9NVP4 752 aa17.79■□□□□ 0.44
LMNA-223ENST00000515459 CCDC196A0A1B0GTZ2 297 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.78■□□□□ 0.44
LMNA-223ENST00000515459 ADAMTS3O15072 1205 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ASGR2P07307 311 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 WEE2P0C1S8 567 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 FGFR4P22455 802 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 CIITAP33076 1130 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ADD1P35611 737 aaKnown RBP17.78■□□□□ 0.44
LMNA-223ENST00000515459 TBC1D8BQ0IIM8 1120 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 GIT2Q14161 759 aa17.78■□□□□ 0.44
LMNA-223ENST00000515459 ADCK5Q3MIX3 580 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms