RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
SUB1-213ENST00000515355 RFC5P40937 340 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 EMC2Q15006 297 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 KRT79Q5XKE5 535 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 HAUS3Q68CZ6 603 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 TMEM40Q8WWA1 233 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 YME1L1Q96TA2 773 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 PLIN2Q99541 437 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 MTRQ99707 1265 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 FDXACB1Q9BRP7 624 aaPredicted RBP12.85□□□□□ -0.35
SUB1-213ENST00000515355 GCOM2Q9BZD3 368 aaPredicted RBP12.85□□□□□ -0.35
SUB1-213ENST00000515355 TTYH1Q9H313 450 aaPredicted RBP12.85□□□□□ -0.35
SUB1-213ENST00000515355 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 MTUS1Q9ULD2 1270 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 TANC1Q9C0D5 1861 aa12.85□□□□□ -0.35
SUB1-213ENST00000515355 LCHNA4D1U4 455 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 GJB5O95377 273 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 SPATA31C1P0DKV0 1188 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 GPC3P51654 580 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 SF3A1Q15459 793 aaKnown RBP12.84□□□□□ -0.35
SUB1-213ENST00000515355 IL17AQ16552 155 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 ODR4Q5SWX8 454 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 FAM228AQ86W67 206 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 LINC01465Q8N7H1 131 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
SUB1-213ENST00000515355 PSPC1Q8WXF1 523 aaKnown RBP12.84□□□□□ -0.35
SUB1-213ENST00000515355 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 CEP89Q96ST8 783 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 RAD9AQ99638 391 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 POLR3CQ9BUI4 534 aaPredicted RBP12.84□□□□□ -0.35
SUB1-213ENST00000515355 ADAMTS10Q9H324 1103 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 DDX19AQ9NUU7 478 aaKnown RBP12.84□□□□□ -0.35
SUB1-213ENST00000515355 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 LRFN2Q9ULH4 789 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 MTMR6Q9Y217 621 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
SUB1-213ENST00000515355 IGKV6-21A0A0C4DH24 114 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.36
SUB1-213ENST00000515355 ZSCAN20P17040 1043 aaPredicted RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 IGFBP4P22692 258 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 EIF4BP23588 611 aaKnown RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 RPA1P27694 616 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 RARRES1P49788 294 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 PDIA5Q14554 519 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 ECM1Q16610 540 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 FAM102BQ5T8I3 360 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 RASSF8Q8NHQ8 419 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 MYLIPQ8WY64 445 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 ARNTL2Q8WYA1 636 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 TOP1MTQ969P6 601 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 CDK5RAP3Q96JB5 506 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 CDX2Q99626 313 aaPredicted RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 ADAM2Q99965 735 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 FTHL17Q9BXU8 183 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 TMX1Q9H3N1 280 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 PRDM12Q9H4Q4 367 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 DHX33Q9H6R0 707 aaKnown RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 POLD4Q9HCU8 107 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 ERVK-5Q9HDB9 667 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
SUB1-213ENST00000515355 INSL6Q9Y581 213 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 SQORQ9Y6N5 450 aa12.83□□□□□ -0.36
SUB1-213ENST00000515355 MGEA5O60502 916 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 DGAT1O75907 488 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 LYPLA2O95372 231 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 DARSP14868 501 aaKnown RBP12.82□□□□□ -0.36
SUB1-213ENST00000515355 MARCKSP29966 332 aaPredicted RBP12.82□□□□□ -0.36
SUB1-213ENST00000515355 PRPHP41219 470 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 CDC42EP1Q00587 391 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 LAMTOR4Q0VGL1 99 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 RESTQ13127 1097 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
SUB1-213ENST00000515355 CATSPER4Q7RTX7 472 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 RTN4RL1Q86UN2 441 aaPredicted RBP12.82□□□□□ -0.36
SUB1-213ENST00000515355 IGSF22Q8N9C0 903 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 RNF169Q8NCN4 708 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 LINC01599Q8WXQ3 324 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 GUCD1Q96NT3 240 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 PPME1Q9Y570 386 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 PCDHB7Q9Y5E2 793 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 STK24Q9Y6E0 443 aa12.82□□□□□ -0.36
SUB1-213ENST00000515355 EVPLQ92817 2033 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 E9PMD0 336 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 RFXAPO00287 272 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
SUB1-213ENST00000515355 TAP1Q03518 808 aa12.81□□□□□ -0.36
SUB1-213ENST00000515355 PADI6Q6TGC4 694 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms