RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ZBTB42B2RXF5 422 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 DUSP11O75319 330 aaKnown RBP21.75■■□□□ 1.07
SSBP2-218ENST00000514493 HMGCRP04035 888 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 ELNP15502 786 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 RTP1P59025 263 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 CACNB2Q08289 660 aaPredicted RBP21.75■■□□□ 1.07
SSBP2-218ENST00000514493 TRIM32Q13049 653 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 AP5M1Q9H0R1 490 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 SEMA6BQ9H3T3 888 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 C17orf75Q9HAS0 396 aa21.75■■□□□ 1.07
SSBP2-218ENST00000514493 ADCY3O60266 1144 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 NMT1P30419 496 aaKnown RBP21.74■■□□□ 1.07
SSBP2-218ENST00000514493 CPT1AP50416 773 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 RAET1EQ8TD07 263 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 K7ENM7 598 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 SEPT4O43236 478 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 TPM3P06753 285 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 PRKAR2AP13861 404 aaKnown RBP21.74■■□□□ 1.07
SSBP2-218ENST00000514493 PRMT2P55345 433 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 LRRC63Q05C16 580 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 SPAG1Q07617 926 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 TBC1D8BQ0IIM8 1120 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 ZCWPW2Q504Y3 356 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 ANKRD40Q6AI12 368 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 STXBP4Q6ZWJ1 553 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 ZNF720Q7Z2F6 126 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 PXYLP1Q8TE99 480 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 NOC3LQ8WTT2 800 aaKnown RBP21.74■■□□□ 1.07
SSBP2-218ENST00000514493 POLR3FQ9H1D9 316 aaPredicted RBP21.74■■□□□ 1.07
SSBP2-218ENST00000514493 RNPEPQ9H4A4 650 aa21.74■■□□□ 1.07
SSBP2-218ENST00000514493 HTTP42858 3142 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 COL1A2P08123 1366 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 H3BRB1 525 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 GAS2O43903 313 aaKnown RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 MAFO75444 373 aaPredicted RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 PPP1R37O75864 691 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 SOX10P56693 466 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 DMP1Q13316 513 aaPredicted RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 ALCAMQ13740 583 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 BRDTQ58F21 947 aaPredicted RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 NELFCDQ8IXH7 590 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 EXOC8Q8IYI6 725 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 SLC17A8Q8NDX2 589 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 ZNF507Q8TCN5 953 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 DUSP9Q99956 384 aaKnown RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 STRA6Q9BX79 667 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 KCTD10Q9H3F6 313 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 TUT1Q9H6E5 874 aaKnown RBP21.73■■□□□ 1.07
SSBP2-218ENST00000514493 SCN10AQ9Y5Y9 1956 aa21.73■■□□□ 1.07
SSBP2-218ENST00000514493 CENPFP49454 3210 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 PRPF6O94906 941 aaKnown RBP21.72■■□□□ 1.07
SSBP2-218ENST00000514493 F2P00734 622 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 NCKAP1LP55160 1127 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 PEX3P56589 373 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 SPIRE2Q8WWL2 714 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 BSNDQ8WZ55 320 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 CTAGE1Q96RT6 745 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 TSG101Q99816 390 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 ST6GALNAC4Q9H4F1 302 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 THAP9Q9H5L6 903 aa21.72■■□□□ 1.07
SSBP2-218ENST00000514493 HOXD13P35453 343 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 KNOP1Q1ED39 458 aaKnown RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 ZNF484Q5JVG2 852 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 MAP3K21Q5TCX8 1036 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 NAP1L5Q96NT1 182 aaPredicted RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 JPH2Q9BR39 696 aaPredicted RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 UPF3AQ9H1J1 476 aaKnown RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 PCDHB13Q9Y5F0 798 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 ZMYM2Q9UBW7 1377 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 IGKV6-21A0A0C4DH24 114 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 NPTX2P47972 431 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 GJA9P57773 515 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 FSCN1Q16658 493 aaKnown RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 ZC2HC1CQ53FD0 456 aaPredicted RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 PPP4R3CPQ6ZMV5 832 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 APTXQ7Z2E3 356 aaKnown RBP21.71■■□□□ 1.07
SSBP2-218ENST00000514493 CSGALNACT2Q8N6G5 542 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 ANKRD20A12PQ8NF67 263 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 TMEM143Q96AN5 459 aa21.71■■□□□ 1.07
SSBP2-218ENST00000514493 A0A1B0GTH6 734 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 RARBP10826 455 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 INSRRP14616 1297 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 CNGA1P29973 690 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 CCND3P30281 292 aaPredicted RBP21.7■■□□□ 1.06
SSBP2-218ENST00000514493 ARL2P36404 184 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 SMTNP53814 917 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 IRX5P78411 483 aaPredicted RBP21.7■■□□□ 1.06
SSBP2-218ENST00000514493 SLAIN1Q8ND83 568 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 TRAPPC12Q8WVT3 735 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 IFT74Q96LB3 600 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 PRDM10Q9NQV6 1147 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 INTS13Q9NVM9 706 aa21.7■■□□□ 1.06
SSBP2-218ENST00000514493 LIMA1Q9UHB6 759 aaKnown RBP21.7■■□□□ 1.06
SSBP2-218ENST00000514493 TRIP12Q14669 1992 aaPredicted RBP21.7■■□□□ 1.06
SSBP2-218ENST00000514493 KCNJ18B7U540 433 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 NKX3-2P78367 333 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 BEX3Q00994 111 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 KCNJ12Q14500 433 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 TCP11X2Q5H9J9 407 aa21.69■■□□□ 1.06
SSBP2-218ENST00000514493 ASAP3Q8TDY4 903 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms