RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CASKIN2Q8WXE0 1202 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 CABS1Q96KC9 395 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SEMA6BQ9H3T3 888 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 TRIM75PA6NK02 468 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 B4E1Z4 1266 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SMIM22K7EJ46 135 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 PPFIA3O75145 1194 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 ALAS1P13196 640 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 LONP1P36776 959 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 CCT5P48643 541 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 HMGCS2P54868 508 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 FCGRTP55899 365 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SPAG1Q07617 926 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 HYIQ5T013 277 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 ENAHQ8N8S7 591 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 P3H4Q92791 437 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 TMEM47Q9BQJ4 181 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SPZ1Q9BXG8 430 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 RPAP3Q9H6T3 665 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 DIS3Q9Y2L1 958 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SIGLEC16A6NMB1 481 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 BMP15O95972 392 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 NDUFB10O96000 172 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 RPN1P04843 607 aaKnown RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 SLC1A4P43007 532 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 CKAP4Q07065 602 aaKnown RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 C2orf54Q08AI8 447 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ZNF543Q08ER8 600 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PAK1Q13153 545 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 AGBL2Q5U5Z8 902 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 RIOX2Q8IUF8 465 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 GPRC5AQ8NFJ5 357 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 FAM76AQ8TAV0 307 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 NOC3LQ8WTT2 800 aaKnown RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 WASF1Q92558 559 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ASCC2Q9H1I8 757 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 MAGEF1Q9HAY2 307 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 SLC40A1Q9NP59 571 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 RBM12Q9NTZ6 932 aaKnown RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PPFIA2O75334 1257 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 GSTA1P08263 222 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PLEKP08567 350 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PIM1P11309 404 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 GCFC2P16383 781 aaKnown RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 SIAH1Q8IUQ4 282 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 CCDC148Q8NFR7 591 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ACTRT1Q8TDG2 376 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 DHTKD1Q96HY7 919 aaPredicted RBP8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ATP6V1G3Q96LB4 118 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 DISC1Q9NRI5 854 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 IL17RBQ9NRM6 502 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 KCNJ14Q9UNX9 436 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 FRMD4BQ9Y2L6 1034 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 PLXNB2O15031 1838 aa8.11□□□□□ -1.11
CLIP1-205ENST00000514271 CCDC194A0A1B0GVG4 234 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 ANKRD65E5RJM6 399 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 GPR25O00155 361 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 CHUKO15111 745 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 NUDT17P0C025 328 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 HSPA8P11142 646 aaKnown RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 GNAZP19086 355 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 JAM2P57087 298 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 HAND2P61296 217 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 SP3Q02447 781 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 GHRHRQ02643 423 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 PFKFB3Q16875 520 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 ERMARDQ5T6L9 678 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 JPH2Q9BR39 696 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 GANQ9H2C0 597 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 RANBP17Q9H2T7 1088 aaKnown RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 KLC4Q9NSK0 619 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 CTNND2Q9UQB3 1225 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 PFASO15067 1338 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 BPTFQ12830 3046 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 SLC15A5A6NIM6 579 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 IGF2BP3O00425 579 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 AOC2O75106 756 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 HOXC6P09630 235 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 DNM2P50570 870 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 SSRP1Q08945 709 aaKnown RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 CBLBQ13191 982 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 TRADDQ15628 312 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 NAB2Q15742 525 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 ZNF467Q7Z7K2 595 aaPredicted RBP8.1□□□□□ -1.11
CLIP1-205ENST00000514271 EHBP1Q8NDI1 1231 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 SLC30A5Q8TAD4 765 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 CYFIP2Q96F07 1278 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 MTMR9Q96QG7 549 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 CCT8L2Q96SF2 557 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 NUP58Q9BVL2 599 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 TSGA10Q9BZW7 698 aa8.1□□□□□ -1.11
CLIP1-205ENST00000514271 AIPL1Q9NZN9 384 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms