RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 IGBP1P78318 339 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 FAM189BP81408 668 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 KRT76Q01546 638 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 C19orf57Q0VDD7 668 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 CDC37Q16543 378 aaPredicted RBP13.71□□□□□ -0.21
SFXN1-210ENST00000513725 ELMSAN1Q6PJG2 1045 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 TMEM47Q9BQJ4 181 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 CACNA2D2Q9NY47 1150 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 ERAP1Q9NZ08 941 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
SFXN1-210ENST00000513725 PCDHA1Q9Y5I3 950 aa13.71□□□□□ -0.21
SFXN1-210ENST00000513725 DOCK8Q8NF50 2099 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 RRN3P2A6NIE6 340 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 TOP3BO95985 862 aaKnown RBP13.7□□□□□ -0.22
SFXN1-210ENST00000513725 ZNF806P0C7X5 589 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 TRIM27P14373 513 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 MARK3P27448 753 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 SP4Q02446 784 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 WTAPQ15007 396 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 CCDC6Q16204 474 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 STOX1Q6ZVD7 989 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 NME8Q8N427 588 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 APPBP2Q92624 585 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 BBC3Q96PG8 261 aaPredicted RBP13.7□□□□□ -0.22
SFXN1-210ENST00000513725 NAPBQ9H115 298 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 DPP7Q9UHL4 492 aa13.7□□□□□ -0.22
SFXN1-210ENST00000513725 LAMA4Q16363 1823 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 GREB1Q4ZG55 1949 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 GPR182O15218 404 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 HRO43593 1189 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 HSD17B4P51659 736 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 BCAR1P56945 870 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 GPATCH4Q5T3I0 446 aaKnown RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 MAMSTRQ6ZN01 415 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 IL31RAQ8NI17 732 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 IER2Q9BTL4 223 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 MAN1C1Q9NR34 630 aa13.69□□□□□ -0.22
SFXN1-210ENST00000513725 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
SFXN1-210ENST00000513725 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 GIPC1O14908 333 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 INPPL1O15357 1258 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
SFXN1-210ENST00000513725 CCR3P51677 355 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 COL28A1Q2UY09 1125 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 ZNF852Q6ZMS4 543 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 TPRG1Q6ZUI0 275 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 ST13P5Q8NFI4 369 aaPredicted RBP13.68□□□□□ -0.22
SFXN1-210ENST00000513725 SMG7Q92540 1137 aaKnown RBP13.68□□□□□ -0.22
SFXN1-210ENST00000513725 PHKBQ93100 1093 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 RPP25Q9BUL9 199 aaKnown RBP13.68□□□□□ -0.22
SFXN1-210ENST00000513725 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 PIDD1Q9HB75 910 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 ST3GAL5Q9UNP4 418 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 GINS2Q9Y248 185 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 NOC2LQ9Y3T9 749 aaKnown RBP13.68□□□□□ -0.22
SFXN1-210ENST00000513725 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
SFXN1-210ENST00000513725 MYH15Q9Y2K3 1946 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 SPATA31C2B4DYI2 1134 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 SNHG28P0DPA3 235 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 CEP68Q76N32 757 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 PROSER1Q86XN7 944 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 TNPO1Q92973 898 aaKnown RBP13.67□□□□□ -0.22
SFXN1-210ENST00000513725 KIF1BPQ96EK5 621 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 MRPL9Q9BYD2 267 aaKnown RBP13.67□□□□□ -0.22
SFXN1-210ENST00000513725 ARRDC1-AS1Q9H2J1 176 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 RNF19AQ9NV58 838 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 TELO2Q9Y4R8 837 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 PCDHA2Q9Y5H9 948 aa13.67□□□□□ -0.22
SFXN1-210ENST00000513725 TENM4Q6N022 2769 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 DOCK5Q9H7D0 1870 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 AXIN1O15169 862 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 FIBPO43427 364 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 STAM2O75886 525 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 GHRHRQ02643 423 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 MTSS1LQ765P7 747 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 FGF14Q92915 247 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 CHRDQ9H2X0 955 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 CPVLQ9H3G5 476 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 TNNQ9UQP3 1299 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 MSRB2Q9Y3D2 182 aa13.66□□□□□ -0.22
SFXN1-210ENST00000513725 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SMIM35A0A1B0GVV1 85 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 CNPP09543 421 aaKnown RBP13.65□□□□□ -0.22
SFXN1-210ENST00000513725 GOLGA8HP0CJ92 632 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 INSRRP14616 1297 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SRSF5Q13243 272 aaKnown RBP13.65□□□□□ -0.22
SFXN1-210ENST00000513725 FZD5Q13467 585 aa13.65□□□□□ -0.22
SFXN1-210ENST00000513725 SH3PXD2AQ5TCZ1 1133 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms