RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SCLT1Q96NL6 688 aa8.2□□□□□ -1.1
HTT-212ENST00000513639 OSMRQ99650 979 aa8.2□□□□□ -1.1
HTT-212ENST00000513639 ADAMTS10Q9H324 1103 aa8.2□□□□□ -1.1
HTT-212ENST00000513639 TTC3P53804 2025 aa8.2□□□□□ -1.1
HTT-212ENST00000513639 MYO7AQ13402 2215 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 MICAL3Q7RTP6 2002 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 IGKV6-21A0A0C4DH24 114 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 A0A0U1RQF3 1178 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 FSD2A1L4K1 749 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 GRXCR2A6NFK2 248 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 GRM6O15303 877 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 ASAP2O43150 1006 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 MAFO75444 373 aaPredicted RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 TDP2O95551 362 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 MMP1P03956 469 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 SKIP12755 728 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 DARSP14868 501 aaKnown RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 KRT2P35908 639 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 GPC3P51654 580 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 CLCN3P51790 818 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 AK2P54819 239 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 KRT17Q04695 432 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 PPP2R5CQ13362 524 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 DSC3Q14574 896 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 COL19A1Q14993 1142 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
HTT-212ENST00000513639 NPY5RQ15761 445 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 FAM102BQ5T8I3 360 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 PTCRAQ6ISU1 281 aaPredicted RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 PIK3AP1Q6ZUJ8 805 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 FAM228AQ86W67 206 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 LRRC71Q8N4P6 559 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 LINC01465Q8N7H1 131 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 KLHL23Q8NBE8 558 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 MICAL1Q8TDZ2 1067 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 TMEM40Q8WWA1 233 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 SLC7A3Q8WY07 619 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 AIFM3Q96NN9 605 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 ALG13Q9NP73 1137 aaKnown RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 TYW1Q9NV66 732 aaKnown RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 SUCLA2Q9P2R7 463 aaPredicted RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 PRKAG3Q9UGI9 489 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 MRPL42Q9Y6G3 142 aaKnown RBP8.19□□□□□ -1.1
HTT-212ENST00000513639 GBF1Q92538 1859 aa8.19□□□□□ -1.1
HTT-212ENST00000513639 DOCK5Q9H7D0 1870 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 GAS2O43903 313 aaKnown RBP8.18□□□□□ -1.1
HTT-212ENST00000513639 MGEA5O60502 916 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 ITGB1P05556 798 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 LINC00271P0C7V0 271 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 ALADP13716 330 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 LAG3P18627 525 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 IBSPP21815 317 aaPredicted RBP8.18□□□□□ -1.1
HTT-212ENST00000513639 SFPQP23246 707 aaKnown RBP eCLIP8.18□□□□□ -1.1
HTT-212ENST00000513639 RFC5P40937 340 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 NCBP1Q09161 790 aaKnown RBP8.18□□□□□ -1.1
HTT-212ENST00000513639 ADAM15Q13444 863 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 EPHA7Q15375 998 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 UGCGQ16739 394 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 MTERF2Q49AM1 385 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 PAN2Q504Q3 1202 aaKnown RBP8.18□□□□□ -1.1
HTT-212ENST00000513639 ZNF410Q86VK4 478 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 FAM178BQ8IXR5 827 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 C4orf19Q8IY42 314 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 GJD3Q8N144 294 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 GTF3C6Q969F1 213 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 GJA10Q969M2 543 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 PPP1R16BQ96T49 567 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 TMEM117Q9H0C3 514 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 IGFLR1Q9H665 355 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 KCNMB3Q9NPA1 279 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 CYP26B1Q9NR63 512 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
HTT-212ENST00000513639 PCDHA12Q9UN75 941 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 LIMCH1Q9UPQ0 1083 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 LZTS1Q9Y250 596 aa8.18□□□□□ -1.1
HTT-212ENST00000513639 H3BQ06 376 aaPredicted RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 SLC37A4O43826 429 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 STBD1O95210 358 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 CTDNEP1O95476 244 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 XRCC6P12956 609 aaKnown RBP eCLIP8.17□□□□□ -1.1
HTT-212ENST00000513639 FDPSP14324 419 aaKnown RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 SSTR3P32745 418 aaPredicted RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 PPM1AP35813 382 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 ALDH7A1P49419 539 aaKnown RBP8.17□□□□□ -1.1
HTT-212ENST00000513639 PLCB3Q01970 1234 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 HYAL1Q12794 435 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 PCBP1Q15365 356 aaKnown RBP eCLIP8.17□□□□□ -1.1
HTT-212ENST00000513639 ME3Q16798 604 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 POTEHQ6S545 545 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 ANO5Q75V66 913 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 ECHDC2Q86YB7 292 aa8.17□□□□□ -1.1
HTT-212ENST00000513639 RHPN2Q8IUC4 686 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms