RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 WDR72Q3MJ13 1102 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 PHF19Q5T6S3 580 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 TMEM200BQ69YZ2 307 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 UNQ6494/PRO21346Q6UXR6 183 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 OTOP2Q7RTS6 562 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 REXO1L1PQ8IX06 675 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 CMIPQ8IY22 773 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 CDYL2Q8N8U2 506 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 LINC01356Q8N9X3 169 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 C1orf162Q8NEQ5 155 aaPredicted RBP3.14□□□□□ -1.91
RNF4-219ENST00000513450 ZNF526Q8TF50 670 aaPredicted RBP3.14□□□□□ -1.91
RNF4-219ENST00000513450 ZCCHC14Q8WYQ9 949 aaKnown RBP3.14□□□□□ -1.91
RNF4-219ENST00000513450 FUBP3Q96I24 572 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNF4-219ENST00000513450 FAXDC2Q96IV6 333 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 HIST1H2AHQ96KK5 128 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 HIST1H2AJQ99878 128 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 KRTAP17-1Q9BYP8 105 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 ANO3Q9BYT9 981 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 HAPLN2Q9GZV7 340 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 MTG2Q9H4K7 406 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 FTSJ1Q9UET6 329 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 Q9UFV3 132 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 TMPRSS11EQ9UL52 423 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 SYNPO2Q9UMS6 1093 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 MRFAP1Q9Y605 127 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 TNKSO95271 1327 aa3.14□□□□□ -1.91
RNF4-219ENST00000513450 NPIPB6E9PJ23 425 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 FZD9O00144 591 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 DDX3XO00571 662 aaKnown RBP eCLIP3.13□□□□□ -1.912e-6■■□□□ 11.9
RNF4-219ENST00000513450 FFAR3O14843 346 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 NRP2O60462 931 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 PCDH8O95206 1070 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 CLEC2LP0C7M8 214 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 RBP3P10745 1247 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 IARSP41252 1262 aaKnown RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 ETV4P43268 484 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 MCL1Q07820 350 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 TOP3AQ13472 1001 aaPredicted RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 SPIDRQ14159 915 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 EIF4HQ15056 248 aaKnown RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 PTPN21Q16825 1174 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 ANO4Q32M45 955 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 CT83Q5H943 113 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 PITRM1Q5JRX3 1037 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 FAM26FQ5R3K3 315 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 TCERG1LQ5VWI1 586 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 CCDC62Q6P9F0 684 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 PGM2L1Q6PCE3 622 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 KCNK18Q7Z418 384 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 ZBTB46Q86UZ6 589 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 LYSMD2Q8IV50 215 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 SLC41A1Q8IVJ1 513 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 IFNL2Q8IZJ0 200 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 CARFQ8N187 725 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 OR5AN1Q8NGI8 311 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 OR14C36Q8NHC7 312 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 EAF2Q96CJ1 260 aaPredicted RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 AJUBAQ96IF1 538 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 YTHDC1Q96MU7 727 aaKnown RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 CAMKK2Q96RR4 588 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 SMAD5Q99717 465 aaKnown RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 NOL10Q9BSC4 688 aaKnown RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 KATNBL1Q9H079 304 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 TMEM168Q9H0V1 697 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 CCM2LQ9NUG4 571 aaPredicted RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 POLR3BQ9NW08 1133 aaPredicted RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 MKS1Q9NXB0 559 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 SAE1Q9UBE0 346 aaPredicted RBP3.13□□□□□ -1.91
RNF4-219ENST00000513450 PRSS50Q9UI38 385 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 PCDHB6Q9Y5E3 794 aa3.13□□□□□ -1.91
RNF4-219ENST00000513450 KLHL33A6NCF5 533 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 NUAK1O60285 661 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 H2AFYO75367 372 aaKnown RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 MT-CO1P00395 513 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 HMGCRP04035 888 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 CYP1A1P04798 512 aaPredicted RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 LPLP06858 475 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 XPAP23025 273 aaPredicted RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 CCND1P24385 295 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 ADCY8P40145 1251 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 MTNR1BP49286 362 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 SLC5A3P53794 718 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 LGALS4P56470 323 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 SESN2P58004 480 aaPredicted RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 TRIM25Q14258 630 aaKnown RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 ZNF124Q15973 351 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 MAN2A1Q16706 1144 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 ABCB5Q2M3G0 1257 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 MUM1Q2TAK8 710 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 TMEM240Q5SV17 173 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 CIAPIN1Q6FI81 312 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 Q6ZUG5 572 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 BCL6BQ8N143 479 aaPredicted RBP3.12□□□□□ -1.91
RNF4-219ENST00000513450 KLHL36Q8N4N3 616 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 PPP1R14CQ8TAE6 165 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 ADAMTS17Q8TE56 1095 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 TGFBRAP1Q8WUH2 860 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 GAB3Q8WWW8 586 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 AUTS2Q8WXX7 1259 aa3.12□□□□□ -1.91
RNF4-219ENST00000513450 JDP2Q8WYK2 163 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms