RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 OSBPL7Q9BZF2 842 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 USP44Q9H0E7 712 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZWILCHQ9H900 591 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 VPS37BQ9H9H4 285 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 TCP11L1Q9NUJ3 509 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ABCC4O15439 1325 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 GOLGA6L10A0A0M3HER8 536 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 H7C1W4 665 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 EVI5O60447 810 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 SMC2O95347 1197 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 GJB6O95452 261 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 STAMBPO95630 424 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF24P17028 368 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 KCNJ6P48051 423 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCT4P50991 539 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 YARSP54577 528 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CTSWP56202 376 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 C21orf58P58505 322 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 IL1RL1Q01638 556 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ODF1Q14990 250 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 SMAD1Q15797 465 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC152Q4G0S7 254 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CAVIN4Q5BKX8 364 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZNF771Q7L3S4 317 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 CCDC84Q86UT8 332 aaPredicted RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRTM3Q86VH5 581 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 LRRC49Q8IUZ0 686 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 PEX5LQ8IYB4 626 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 RBM17Q96I25 401 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 PPP1R9BQ96SB3 815 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 NTPCRQ9BSD7 190 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 TTPALQ9BTX7 342 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 BICC1Q9H694 974 aaKnown RBP5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 DACT1Q9NYF0 836 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 GGA3Q9NZ52 723 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 KIAA1468Q9P260 1216 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ZMYM5Q9UJ78 669 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ANKRD36CQ5JPF3 1778 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 ANKRD31Q8N7Z5 1873 aa5.53□□□□□ -1.52
TRAPPC11-208ENST00000511955 COL11A2P13942 1736 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 WTIPA6NIX2 430 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 B2RBV5 119 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 FRS3O43559 492 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CDKL5O76039 1030 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 EPN2O95208 641 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ITGA6P23229 1130 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 HNF4AP41235 474 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 PRSS12P56730 875 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 KLHL30Q0D2K2 578 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRDNQ13061 729 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 PPFIA1Q13136 1202 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CRY2Q49AN0 593 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPDYCQ5MJ68 293 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 RNF219Q5W0B1 726 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ALKBH5Q6P6C2 394 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRAF7Q6Q0C0 670 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP51Q70EK9 711 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC170Q8IYT3 715 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZSWIM2Q8NEG5 633 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 IL17RDQ8NFM7 739 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC148Q8NFR7 591 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TTLL11Q8NHH1 800 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 BICD1Q96G01 975 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC138Q96M89 665 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 SH3GL1Q99961 368 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 DHRS4Q9BTZ2 278 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ACAD9Q9H845 621 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMEM165Q9HC07 324 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 AIPL1Q9NZN9 384 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CALCOCO1Q9P1Z2 691 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 NSFL1CQ9UNZ2 370 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMEM98Q9Y2Y6 226 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 COL24A1Q17RW2 1714 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TAF1P21675 1872 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CACNA1SQ13698 1873 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZBTB14O43829 449 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 EOMESO95936 686 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 FAM153BP0C7A2 387 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 FGFR4P22455 802 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CNTFP26441 200 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ELF1P32519 619 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ADH7P40394 386 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 NOP2P46087 812 aaKnown RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 IRX1P78414 480 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CBX1P83916 185 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 PDE3AQ14432 1141 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPARCL1Q14515 664 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CLUL1Q15846 466 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC57Q2TAC2 916 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMEM67Q5HYA8 995 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 GPR155Q7Z3F1 870 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CBARPQ8N350 705 aaPredicted RBP5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 C7orf31Q8N865 590 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 USP38Q8NB14 1042 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 ARHGAP45Q92619 1136 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 CNKSR1Q969H4 720 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 KAZALD1Q96I82 304 aa5.52□□□□□ -1.53
TRAPPC11-208ENST00000511955 APOL5Q9BWW9 433 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms