RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 CRYGNQ8WXF5 182 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 FAM167AQ96KS9 214 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 TCEANC2Q96MN5 208 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 NECTIN4Q96NY8 510 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 ADAM7Q9H2U9 754 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
DDX41-211ENST00000510171 FAM86C1Q9NVL1 165 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 TECTAO75443 2155 aa11.79□□□□□ -0.52
DDX41-211ENST00000510171 DOCK5Q9H7D0 1870 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 A0A0U1RQF3 1178 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 KLF18A0A0U1RQI7 1052 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 CCDC196A0A1B0GTZ2 297 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 CXCL14O95715 111 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 EOMESO95936 686 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 CDC27P30260 824 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 ADD1P35611 737 aaKnown RBP11.78□□□□□ -0.52
DDX41-211ENST00000510171 ALDH7A1P49419 539 aaKnown RBP11.78□□□□□ -0.52
DDX41-211ENST00000510171 ITIH3Q06033 890 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 PRR16Q569H4 304 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 UBALD2Q8IYN6 164 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 SNX27Q96L92 541 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 ZMYND12Q9H0C1 365 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 C6orf50Q9HD87 102 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 NAP1L2Q9ULW6 460 aaPredicted RBP11.78□□□□□ -0.52
DDX41-211ENST00000510171 HCFC2Q9Y5Z7 792 aa11.78□□□□□ -0.52
DDX41-211ENST00000510171 ESYT2A0FGR8 921 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 C2orf71A6NGG8 1288 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 WDR64B1ANS9 1081 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 H0Y858 1186 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.53
DDX41-211ENST00000510171 OATP04181 439 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
DDX41-211ENST00000510171 GNA11P29992 359 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 CIITAP33076 1130 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 CA8P35219 290 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 MTHFRP42898 656 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 RCAN1P53805 252 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 FGD1P98174 961 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 SLC39A11Q8N1S5 342 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 LINC01465Q8N7H1 131 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 TMEM87AQ8NBN3 555 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 CCDC12Q8WUD4 166 aaPredicted RBP11.77□□□□□ -0.53
DDX41-211ENST00000510171 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
DDX41-211ENST00000510171 SCLT1Q96NL6 688 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 SORCS3Q9UPU3 1222 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 KAT6AQ92794 2004 aa11.77□□□□□ -0.53
DDX41-211ENST00000510171 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 ADAMTS3O15072 1205 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 PDGFBP01127 241 aaPredicted RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 HMGB1P09429 215 aaKnown RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 FGFR4P22455 802 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 METAP2P50579 478 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX41-211ENST00000510171 GPC3P51654 580 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 BCAR1P56945 870 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 KRT32Q14532 448 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 ADCK5Q3MIX3 580 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 ATAT1Q5SQI0 421 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 REXO1Q8N1G1 1221 aaKnown RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 HELQQ8TDG4 1101 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 TMEM169Q96HH4 297 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 MRPL9Q9BYD2 267 aaKnown RBP11.76□□□□□ -0.53
DDX41-211ENST00000510171 DISC1Q9NRI5 854 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 CDH22Q9UJ99 828 aa11.76□□□□□ -0.53
DDX41-211ENST00000510171 ZNF318Q5VUA4 2279 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 NT5C1B-RDH14C9J2C7 533 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 ZNF862O60290 1169 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 BRD1O95696 1058 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 SFNP31947 248 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 CDC42EP1Q00587 391 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 PRKCEQ02156 737 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 TBC1D8BQ0IIM8 1120 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 RARS2Q5T160 578 aaKnown RBP11.75□□□□□ -0.53
DDX41-211ENST00000510171 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 C12orf76Q8N812 135 aaPredicted RBP11.75□□□□□ -0.53
DDX41-211ENST00000510171 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 RSPH1Q8WYR4 309 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 RIT2Q99578 217 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 GCOM2Q9BZD3 368 aaPredicted RBP11.75□□□□□ -0.53
DDX41-211ENST00000510171 CHST12Q9NRB3 414 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
DDX41-211ENST00000510171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 CARNS1A5YM72 827 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 PROB1E7EW31 1015 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 PRPF3O43395 683 aaKnown RBP11.74□□□□□ -0.53
DDX41-211ENST00000510171 GAS7O60861 476 aa11.74□□□□□ -0.53
DDX41-211ENST00000510171 CSDE1O75534 798 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms