RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PRRT4C9JH25 899 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 BOLA2-SMG1P6H3BVE0 249 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 TULP2O00295 520 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 SLC27A2O14975 620 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 TSPAN6O43657 245 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 CLEC3AO75596 197 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 ALDH1B1P30837 517 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 PPP2R5BQ15173 497 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 SLC4A8Q2Y0W8 1093 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 GABPB2Q8TAK5 448 aaPredicted RBP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 UHMK1Q8TAS1 419 aaKnown RBP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 SH3TC2Q8TF17 1288 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 E2F7Q96AV8 911 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 ZBTB10Q96DT7 871 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 MRFAP1L1Q96HT8 127 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 RMDN2Q96LZ7 410 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 MMTAG2Q9BU76 263 aaKnown RBP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 DSCC1Q9BVC3 393 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 TRPV5Q9NQA5 729 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 ZMAT5Q9UDW3 170 aaKnown RBP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 FTSJ1Q9UET6 329 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 PCSK1NQ9UHG2 260 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 POLR3KQ9Y2Y1 108 aaPredicted RBP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 RWDD3Q9Y3V2 267 aa5.21□□□□□ -1.58
NIPBL-206ENST00000509429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.21□□□□□ -1.58
NIPBL-206ENST00000509429 CCDC88BA6NC98 1476 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TMCO5BA8MYB1 307 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 H0YHG0 523 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TREHO43280 583 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 IL4RP24394 825 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 OAS2P29728 719 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 KIF5BP33176 963 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 MLLT6P55198 1093 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 SESN3P58005 492 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 SARNPP82979 210 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 BIRC3Q13489 604 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 WTAPQ15007 396 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 SEPT7Q16181 437 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 ZSCAN26Q16670 478 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 LMBRD2Q68DH5 695 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 ALG1LQ6GMV1 187 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 LAIR1Q6GTX8 287 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 ERAP2Q6P179 960 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 C16orf54Q6UWD8 224 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 RASSF3Q86WH2 238 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 NKAIN3Q8N8D7 197 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 PPHLN1Q8NEY8 458 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 GSDMAQ96QA5 445 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TMX1Q9H3N1 280 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 SH3GLB2Q9NR46 395 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TRMT1Q9NXH9 659 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 BIN2Q9UBW5 565 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TBK1Q9UHD2 729 aa5.2□□□□□ -1.58
NIPBL-206ENST00000509429 TMEFF2Q9UIK5 374 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 DDX41Q9UJV9 622 aaKnown RBP5.2□□□□□ -1.58
NIPBL-206ENST00000509429 H0Y3Z8 333 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 CYP7B1O75881 506 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 MMEP08473 750 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 ACRV1P26436 265 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 NOP2P46087 812 aaKnown RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 GTF2A1P52655 376 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 SNX16P57768 344 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 FSTL1Q12841 308 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 MLECQ14165 292 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 MYBPC3Q14896 1274 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 NFE2Q16621 373 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 WDR45BQ5MNZ6 344 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 SLC10A5Q5PT55 438 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 BNC2Q6ZN30 1099 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 MCM10Q7L590 875 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 WDR66Q8TBY9 1149 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 N4BP2L2Q92802 583 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 SKA1Q96BD8 255 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 GPR101Q96P66 508 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 LRRC37BQ96QE4 947 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 UIMC1Q96RL1 719 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 MKRN2Q9H000 416 aaKnown RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 ACBD3Q9H3P7 528 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 HOMER2Q9NSB8 354 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 C6orf203Q9P0P8 240 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-206ENST00000509429 PARP2Q9UGN5 583 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 TAGLN3Q9UI15 199 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 ADAM29Q9UKF5 820 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 TPCN1Q9ULQ1 816 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 TLR6Q9Y2C9 796 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 SIT1Q9Y3P8 196 aa5.19□□□□□ -1.58
NIPBL-206ENST00000509429 FAM170AA1A519 330 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 CPLX1O14810 134 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 IKBKBO14920 756 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 E2F6O75461 281 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 BAIAP3O94812 1187 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 KIAA0754O94854 1291 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 IDEP14735 1019 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 SMARCA1P28370 1054 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 SLC7A5Q01650 507 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 MECOMQ03112 1051 aa5.18□□□□□ -1.58
NIPBL-206ENST00000509429 CHAF1AQ13111 956 aaPredicted RBP5.18□□□□□ -1.58
NIPBL-206ENST00000509429 GNL2Q13823 731 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms