RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PSRC1Q6PGN9 363 aaPredicted RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 RASGRP2Q7LDG7 609 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 TBC1D10CQ8IV04 446 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 FBXO16Q8IX29 292 aaPredicted RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 TMEM199Q8N511 208 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 UBAC1Q9BSL1 405 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 DSCC1Q9BVC3 393 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 KRT23Q9C075 422 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 MTIF3Q9H2K0 278 aaKnown RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 TUT1Q9H6E5 874 aaKnown RBP8.67□□□□□ -1.02
CCSER1-208ENST00000509109 KAT14Q9H8E8 782 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 TBX21Q9UL17 535 aa8.67□□□□□ -1.02
CCSER1-208ENST00000509109 PDE2AO00408 941 aaPredicted RBP8.66□□□□□ -1.02
CCSER1-208ENST00000509109 NFIBO00712 420 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 GLB1P16278 677 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 CALML3P27482 149 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
CCSER1-208ENST00000509109 SNAP25P60880 206 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 BAATQ14032 418 aaPredicted RBP8.66□□□□□ -1.02
CCSER1-208ENST00000509109 PPP2R5BQ15173 497 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 C9orf50Q5SZB4 431 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 TTBK2Q6IQ55 1244 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 MFSD5Q6N075 450 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 ACAD11Q709F0 780 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 FAM126BQ8IXS8 530 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 TMEM130Q8N3G9 435 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 RETREG2Q8NC44 543 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 DNERQ8NFT8 737 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 MORC4Q8TE76 937 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 RUFY2Q8WXA3 655 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 PMEPA1Q969W9 287 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 OSMRQ99650 979 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 ADAM19Q9H013 955 aa8.66□□□□□ -1.02
CCSER1-208ENST00000509109 GNEQ9Y223 722 aaKnown RBP8.66□□□□□ -1.02
CCSER1-208ENST00000509109 CHD7Q9P2D1 2997 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 ASTN1O14525 1302 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 TNKSO95271 1327 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 ABCB11O95342 1321 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 SCO2A0A1W2PP80 73 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 NKRFO15226 690 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCSER1-208ENST00000509109 DHX16O60231 1041 aaKnown RBP8.65□□□□□ -1.02
CCSER1-208ENST00000509109 ICMTO60725 284 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 CDK7P50613 346 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 RPS6P62753 249 aaKnown RBP8.65□□□□□ -1.02
CCSER1-208ENST00000509109 EHHADHQ08426 723 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 TRDNQ13061 729 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 TRAF1Q13077 416 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 DUSP28Q4G0W2 176 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 CXCL17Q6UXB2 119 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 SLC30A10Q6XR72 485 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 EEPD1Q7L9B9 569 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.65□□□□□ -1.02
CCSER1-208ENST00000509109 SCFD2Q8WU76 684 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 SLC7A3Q8WY07 619 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 KLHDC7BQ96G42 594 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 ZKSCAN3Q9BRR0 538 aa8.65□□□□□ -1.02
CCSER1-208ENST00000509109 KIAA1217Q5T5P2 1943 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 TANC1Q9C0D5 1861 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 B4E1Z4 1266 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 H3BRJ5 948 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 TM4SF5O14894 197 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 CTAGE5O15320 804 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 DYNC1LI2O43237 492 aaPredicted RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 KPNA6O60684 536 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 IGHDP01880 384 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 PARP1P09874 1014 aaKnown RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 ITGB8P26012 769 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 BEX3Q00994 111 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 ITGA7Q13683 1181 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 SART3Q15020 963 aaKnown RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 CDC37Q16543 378 aaPredicted RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 USH1GQ495M9 461 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 IFIT1BQ5T764 474 aaKnown RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 TAPT1Q6NXT6 567 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 GJD3Q8N144 294 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 ENAHQ8N8S7 591 aaPredicted RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 OR6J1Q8NGC5 347 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 ANKS1AQ92625 1134 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 FAM161BQ96MY7 647 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 WDR11Q9BZH6 1224 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 HIPK3Q9H422 1215 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 LATS2Q9NRM7 1088 aa8.64□□□□□ -1.03
CCSER1-208ENST00000509109 SPTBN5Q9NRC6 3674 aaKnown RBP8.64□□□□□ -1.03
CCSER1-208ENST00000509109 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.63□□□□□ -1.03
CCSER1-208ENST00000509109 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.63□□□□□ -1.03
CCSER1-208ENST00000509109 RBM47A0AV96 593 aaKnown RBP8.63□□□□□ -1.03
CCSER1-208ENST00000509109 ERICH2A1L162 156 aa8.63□□□□□ -1.03
CCSER1-208ENST00000509109 ADAM11O75078 769 aa8.63□□□□□ -1.03
CCSER1-208ENST00000509109 CD4P01730 458 aa8.63□□□□□ -1.03
CCSER1-208ENST00000509109 SUPT20HL2P0C7V6 817 aa8.63□□□□□ -1.03
CCSER1-208ENST00000509109 GOLGA8HP0CJ92 632 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms