RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 CDH24Q86UP0 819 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 RPAP2Q8IXW5 612 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SLFN12Q8IYM2 578 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 ZNF444Q8N0Y2 327 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 MB21D1Q8N884 522 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 RIN3Q8TB24 985 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 BAHD1Q8TBE0 780 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SSH3Q8TE77 659 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 CPLX3Q8WVH0 158 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 TMEM40Q8WWA1 233 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 LPAR1Q92633 364 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 DDX11Q96FC9 970 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 MPHOSPH6Q99547 160 aaKnown RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SRRTQ9BXP5 876 aaKnown RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 SENP6Q9GZR1 1112 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 MROH8Q9H579 483 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 RPAP3Q9H6T3 665 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 MORF4L1Q9UBU8 362 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 STAP2Q9UGK3 403 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 ZMYND8Q9ULU4 1186 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 CNPY2Q9Y2B0 182 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 EXOC6BQ9Y2D4 811 aa4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 COL2A1P02458 1487 aaPredicted RBP4.47□□□□□ -1.69
HMGN1P11-201ENST00000508668 FAM86C2PA6NEL3 165 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 PRR19A6NJB7 356 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ERC2O15083 957 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ZBED4O75132 1171 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 SLC25A27O95847 323 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 EOMESO95936 686 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 SSBP05455 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 RARBP10826 455 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 IMPDH2P12268 514 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 SYN1P17600 705 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ATF4P18848 351 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 POLR2BP30876 1174 aaKnown RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 GBP1P32455 592 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 TDO2P48775 406 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 FXR1P51114 621 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 DYNLL1P63167 89 aaKnown RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ARID5AQ03989 594 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ICA1Q05084 483 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 NLRC3Q7RTR2 1065 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 RNF180Q86T96 592 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 TDHQ8IZJ6 230 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 FAM181AQ8N9Y4 354 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 CYB5D2Q8WUJ1 264 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ATG4CQ96DT6 458 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 CCDC74BQ96LY2 380 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 CRBNQ96SW2 442 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 KIF2CQ99661 725 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 LRRCC1Q9C099 1032 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 KIAA1683Q9H0B3 1180 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 IL1RAPL2Q9NP60 686 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ATP8A2Q9NTI2 1148 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 PAG1Q9NWQ8 432 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ATP11BQ9Y2G3 1177 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 SLC4A4Q9Y6R1 1079 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 ZNF532Q9HCE3 1301 aa4.46□□□□□ -1.7
HMGN1P11-201ENST00000508668 DOCK1Q14185 1865 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 KIAA0100Q14667 2235 aaKnown RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 B4DLN1 442 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 RBAK-RBAKDNI3L0D1 243 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 DNM1LO00429 736 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ZEB2O60315 1214 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 MBD4O95243 580 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ZFYP08048 801 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 NME1P15531 152 aaKnown RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 PDE6AP16499 860 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 GNAT2P19087 354 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 VCAM1P19320 739 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ITIH2P19823 946 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ETV3P41162 512 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 MRPL12P52815 198 aaKnown RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 CHMP4BP1P59074 171 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 CACNB2Q08289 660 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 MOGSQ13724 837 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 CPSF6Q16630 551 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ZNF746Q6NUN9 644 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 CEP85Q6P2H3 762 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 RUFY4Q6ZNE9 571 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 LSRQ86X29 649 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 SPICE1Q8N0Z3 855 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ANKRD35Q8N283 1001 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 DEFB123Q8N688 67 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 NUP133Q8WUM0 1156 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 TRIB2Q92519 343 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 EAF2Q96CJ1 260 aaPredicted RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 ANAPC16Q96DE5 110 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 HEXIM2Q96MH2 286 aaKnown RBP4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 MMP19Q99542 508 aa4.45□□□□□ -1.7
HMGN1P11-201ENST00000508668 MTIF3Q9H2K0 278 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms