RNA–Protein interactions for RNA: ENST00000508602.5

PTPN20-219, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-219ENST00000508602 IGSF10Q6WRI0 2623 aa11.17□□□□□ -0.62
PTPN20-219ENST00000508602 EVPLQ92817 2033 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 TAF4O00268 1085 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 TBC1D4O60343 1298 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 PDHBP11177 359 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 LAG3P18627 525 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 PBX3P40426 434 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 MRPS6P82932 125 aaKnown RBP11.16□□□□□ -0.62
PTPN20-219ENST00000508602 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
PTPN20-219ENST00000508602 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 GPR149Q86SP6 731 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 SLC27A5Q9Y2P5 690 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 PCDHB7Q9Y5E2 793 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 BPTFQ12830 3046 aa11.16□□□□□ -0.62
PTPN20-219ENST00000508602 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 SRRM3A6NNA2 597 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 GPAA1O43292 621 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 MGEA5O60502 916 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 APPP05067 770 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 TGFB3P10600 412 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 GCGRP47871 477 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 PPARAQ07869 468 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 RSPH3Q86UC2 560 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.62
PTPN20-219ENST00000508602 THAP11Q96EK4 314 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
PTPN20-219ENST00000508602 ABCB11O95342 1321 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-219ENST00000508602 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
PTPN20-219ENST00000508602 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 HSPD1P10809 573 aaKnown RBP11.14□□□□□ -0.63
PTPN20-219ENST00000508602 STARD6P59095 220 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 PAK2Q13177 524 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 LPAL2Q16609 132 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
PTPN20-219ENST00000508602 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 TUBE1Q9UJT0 475 aa11.14□□□□□ -0.63
PTPN20-219ENST00000508602 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-219ENST00000508602 SPAG17Q6Q759 2223 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 M0R2C6 588 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 TM4SF5O14894 197 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 LRP3O75074 770 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 FGFR1P11362 822 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 GNAT2P19087 354 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 KRT17Q04695 432 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 PTPN14Q15678 1187 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 FAM160A2Q8N612 972 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 APPBP2Q92624 585 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 SEMA4GQ9NTN9 838 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
PTPN20-219ENST00000508602 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
PTPN20-219ENST00000508602 C9IYK1 514 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 OPLAHO14841 1288 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 CXCL14O95715 111 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 PPM1AP35813 382 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 RPIAP49247 311 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 CTDSPL2Q05D32 466 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 TMEM62Q0P6H9 643 aa11.12□□□□□ -0.63
PTPN20-219ENST00000508602 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms